Protein

View in Explore
Genbank accession
QDH45617.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIISLFTRQAPTIAGYQFDAVLEDTLDVSVEWTMYPVESGVNVNDHRIIQPVRWTMTGAVSNNPLKVQLTDFLAGGLSNLTNNPYVAAVAGLAAGFLAGSDQTRASTTLEFLITLMRSGEPFAIDAGDIQLQNMVISRIGRTKDISNESGLIFVCEMQELITLDRLQTLGQPSQMQLRDGDPTKSALSSVVKKGQQIAKDVNDTVSTSVNNVLDGIF
Physico‐chemical
properties
protein length:218 AA
molecular weight: 23597,53800 Da
isoelectric point:4,56783
aromaticity:0,05963
hydropathy:0,03394

Domains

Domains [InterPro]
DC_0601
STR
1–218
DC_0601
IPR048494
ATT
19–164
IPR048494
QDH45617.1
1 218
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-164 | STR 165-218
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_AAM22
[NCBI] 		2588092 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45617.1 [NCBI]
Genbank nucleotide accession
MK798142.1 [NCBI]
CDS location
range 22169 -> 22825
strand +
CDS
ATGAGCATTATCAGTTTATTCACCCGTCAGGCACCTACAATTGCTGGTTACCAGTTTGATGCGGTACTGGAAGATACACTGGACGTATCTGTAGAGTGGACCATGTACCCCGTCGAATCCGGCGTGAATGTGAACGACCACCGCATCATCCAGCCTGTCCGCTGGACCATGACCGGTGCAGTGAGTAATAACCCTCTCAAAGTGCAGCTGACTGATTTTCTTGCAGGCGGATTGTCGAACCTTACAAACAATCCTTATGTTGCCGCCGTGGCAGGCCTTGCTGCAGGTTTTCTCGCCGGTAGTGACCAGACCCGCGCATCCACTACGCTTGAGTTCCTAATCACTCTCATGCGTTCTGGTGAGCCTTTTGCTATTGATGCGGGTGATATTCAGTTACAGAATATGGTCATCAGCCGCATCGGTCGCACCAAAGACATTTCCAATGAGTCCGGATTAATTTTCGTCTGTGAGATGCAGGAACTGATTACCCTTGACCGGTTGCAGACACTCGGACAGCCTTCACAAATGCAACTCCGTGACGGTGACCCGACAAAGTCAGCACTGTCATCAGTTGTTAAGAAGGGTCAGCAGATTGCTAAAGACGTTAATGATACCGTGAGTACCTCCGTCAATAACGTACTGGATGGGATATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
704c18b4e2c232de1f2384079acf9d13e25787b6dc7905290cb1672d0a372d91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagM_AAM22 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank