Protein

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Genbank accession
AEA73200.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGIYLNRVTFNQGIQVPGAGNGLTGMFVGPGDGATYDNVNLDIISWYGIGFKSSQGTGPRTIVFNVRDGEISARGNINSQRQVRAEAAAPIAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23493,69040 Da
isoelectric point:6,07765
aromaticity:0,10046
hydropathy:-0,37123

Domains

Domains [InterPro]
DC_0466
STR
1–217
DC_0466
IPR005601
STR
56–193
IPR005601
AEA73200.1
1 219
Architecture
STR
STR 1-217 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEA73200.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,4023
Central domain 121 208 89 0,1428
C-terminal 209 219 10 0,9268
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Shfl2
[NCBI] 		1002725 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEA73200.1 [NCBI]
Genbank nucleotide accession
HM035025 [NCBI]
CDS location
range 151114 -> 151773
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACCGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGCGGTATTTATCTAAACCGAGTTACCTTTAATCAGGGTATTCAAGTCCCGGGAGCTGGCAATGGTCTGACCGGGATGTTTGTTGGGCCAGGTGATGGAGCAACTTATGATAATGTTAACCTTGATATAATATCTTGGTATGGTATCGGATTTAAATCATCTCAAGGAACAGGACCTAGGACAATTGTTTTTAACGTTCGTGACGGTGAAATTTCGGCCCGTGGTAATATAAATTCACAGCGTCAGGTGCGAGCCGAAGCCGCAGCGCCCATTGCCGCAAATGACCTTACTAGAAAGGACTATGTTGATGGAGCAATAAATACTGTTACGGCAAATGCGAACTCTAGAGTGTTACGATCTGGCGACACTATGACGGGTAACTTAACCGCACCAAACTTTTTTTCGCAGAATCCTGCATCTCAACCTTCACACGTTCCGCGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
458eb7404d20b2bf1ceec1624bf11d52903df51523776ea49fb41462af997cfc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of Shigella phages isolated from Brazil Gregoracci,G.B., Carazzolle,M.F., Brocchi,M. and Mieczkowski,P.A. 2015-04-10 — GenBank