Protein

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Genbank accession
YP_009223118.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MKMFLLDHQQQVRKWLTDKDFVEATLTEQINAADELKFSLPLKGRLPASLYFAVIPRPRHDDYLLFKIIQEQVQSDRVQYTCIEAAYDELKSYHFIKDIRPQDRPASYMLEAALEGTRWEVGQVYDNGTNSTNFYYISTLEAIQKVVNLFNLEATFSVSLDAQKVQVVRRQVNLYSQQGERTGKRFEYGSNLLTVEREENTDSLVTALIGRGKGEAVYHDGDGNENAEDQAPDGYGRRINFADVVWSKAHGNPVDKPQGQEYVEDPDATAAYGFDNGKPRIGIEVFEDITDPNELINATWNALQVLKRPKVSFKANVMDVGSLGLGDTVAIIRHDIQIEYFTRVYKVDHNLLDEQQNTIELGDNLSSNSMTSTIASMSGAIDKVQEIAGYAATSANGKNKNYYSQAQPTYGVEGDLWYKDLGNGETELYQFHNGNWILISSTRDLSQAKQEINAELDKLKQQDEATGIDLEKVHGTLKDVEDTANQAFATGQKNSADLTTLDGSITGRVTKVLTDGGYATQSWTQGQLKLNADNFNVQIADVQKTVNGNSDKIAQINIDLSGIQQTVATKADVSEVNQMANNWSVKVEKLDQKLEQRTGVNPNMLNGTADWSGDWHQDDASVGNPSIQKIDMNYVKDGWTDPEGNPAIIAPSSGDSFAPNKVVNLTRGTYTLSGWTYAGIDLDPFYASPPSFLNKDKAGEVSDTVVFNKATPNQWTRCYFTFTVTKDGLISLGPLDVRGYHIGSLKLEKGDKTTPWVPSSEDRYKNTGEQLSMINIDAGNILFKSNKIFMDAASTVFSGKAFIPDAAISNLTADKITTGTLNAGLLNVINVNANSITTGNIKGPNLDINLATGEVIFGRGRIHDTSDAIDINVDQRYISTASGSARVMLKNGEMQLIEPTLFDLSTDPYLRISNAVSGTAFSGGVIEGRKTAVITNKDNNAWAFSTPIGTMNFSGLSTGQSYNGSWLPTIIGGADRGVFISGGQAFDMGNISASPYIQIGTREPGGSYWSDRVVIDGAFVHIPSTWRRTTSGGANVVINPDGALTRVASATKYKTDIQRSYVSEYGERLLGLPTATWIDKAELKRYNEGESQTKPTRYFGMIAEDLADAGLEMLVQRNLEGGLEGIEYDRIGVALIPVIKQLKDKVKELEDKLNG
Physico‐chemical
properties
protein length:1155 AA
molecular weight: 127018,08360 Da
isoelectric point:4,91779
aromaticity:0,08485
hydropathy:-0,43039

Domains

Domains [InterPro]
DC_0109
STR
1–1106
DC_0109
IPR007119
Unmapped
25–362
IPR007119 Coil IPR030392
IPR010572
ENZ
93–365
IPR010572 DC_0546
YP_009223118.1
1 1155
Architecture
STR
RBD
STR 1-1106 | RBD 1107-1154 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LfeSau
[NCBI] 		1567453 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus fermentum
[NCBI] 		1613 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009223118.1 [NCBI]
Genbank nucleotide accession
NC_029068 [NCBI]
CDS location
range 13210 -> 16677
strand +
CDS
ATGAAAATGTTCCTCTTAGACCATCAACAGCAGGTCAGGAAGTGGCTAACCGATAAGGACTTCGTGGAAGCAACTTTAACCGAACAGATTAACGCGGCGGACGAACTAAAGTTTTCGCTACCATTAAAGGGCCGGCTACCCGCCTCCCTCTACTTCGCGGTTATCCCACGGCCCCGCCACGATGACTACTTACTTTTTAAGATTATCCAAGAACAGGTACAAAGTGACCGGGTCCAATACACGTGCATTGAAGCGGCCTATGATGAGTTAAAGTCGTACCACTTCATTAAAGATATTCGGCCGCAAGACCGGCCTGCTTCGTATATGCTTGAGGCCGCTTTGGAGGGGACCCGCTGGGAAGTTGGTCAAGTCTACGACAATGGGACGAACTCAACTAACTTCTACTACATTAGTACCTTAGAAGCAATCCAAAAGGTCGTTAACCTCTTTAATCTCGAAGCCACGTTTAGCGTTTCCCTAGACGCGCAAAAAGTGCAAGTGGTCCGCCGTCAAGTGAACCTATACTCCCAACAGGGGGAGCGGACGGGTAAACGCTTTGAATATGGAAGCAACCTACTAACCGTGGAAAGGGAAGAAAACACGGACAGCTTGGTCACGGCCCTAATTGGTCGTGGAAAAGGGGAAGCGGTCTACCACGACGGCGACGGCAACGAAAACGCCGAAGATCAAGCCCCCGATGGTTACGGCCGCCGGATTAACTTCGCCGACGTGGTCTGGAGTAAGGCCCATGGGAACCCGGTAGACAAACCGCAAGGGCAAGAGTACGTGGAAGACCCAGACGCGACCGCGGCTTATGGGTTTGACAACGGGAAACCACGGATCGGAATAGAAGTTTTTGAAGACATTACCGACCCCAACGAACTGATTAACGCGACATGGAATGCGTTACAAGTCTTGAAGCGGCCAAAGGTCAGTTTTAAAGCCAATGTAATGGACGTCGGGAGCCTGGGTCTAGGTGATACCGTGGCAATTATTCGCCACGATATTCAGATAGAGTACTTTACCCGGGTTTACAAGGTTGACCATAATCTTCTCGATGAACAACAGAACACCATCGAACTAGGCGACAACCTTAGCAGTAACTCGATGACTTCGACGATCGCTTCAATGAGTGGGGCAATTGATAAGGTGCAAGAAATCGCGGGTTACGCCGCCACCTCGGCTAACGGGAAGAATAAGAATTACTACTCACAAGCACAACCGACGTATGGGGTAGAGGGTGACCTCTGGTACAAAGACCTTGGGAATGGTGAAACGGAACTTTACCAATTCCACAATGGAAACTGGATTCTGATATCTTCGACCCGTGACCTAAGTCAAGCGAAGCAAGAAATTAACGCCGAACTTGACAAACTAAAACAGCAAGACGAGGCTACCGGGATTGACCTGGAAAAGGTTCATGGGACGTTAAAAGACGTTGAAGACACCGCTAATCAGGCCTTCGCAACAGGGCAAAAGAACTCGGCCGACTTAACCACACTTGATGGGTCAATCACCGGTAGGGTAACCAAAGTTTTAACCGACGGCGGTTACGCCACTCAATCATGGACCCAAGGACAGTTAAAATTAAACGCGGATAACTTCAATGTTCAAATTGCCGACGTTCAAAAGACGGTCAACGGAAACTCTGATAAGATTGCACAAATTAATATTGACTTATCGGGGATTCAACAAACAGTCGCAACTAAGGCCGACGTGTCGGAAGTCAATCAAATGGCCAACAACTGGTCAGTCAAGGTTGAAAAGCTAGACCAAAAGCTTGAGCAACGAACCGGGGTTAACCCGAATATGCTCAACGGGACGGCTGACTGGTCGGGGGACTGGCACCAAGACGACGCCTCCGTGGGTAACCCTTCCATTCAAAAAATCGACATGAACTATGTAAAGGACGGCTGGACCGACCCGGAAGGGAACCCCGCAATTATTGCCCCTTCCTCTGGTGACAGTTTTGCGCCTAATAAGGTAGTTAACTTAACTCGCGGGACCTACACTCTTAGCGGGTGGACATATGCGGGGATCGATCTAGACCCGTTTTATGCTTCACCACCTAGTTTCCTAAACAAAGACAAGGCGGGAGAAGTTAGTGATACGGTCGTTTTTAACAAAGCGACCCCTAACCAGTGGACTCGTTGCTACTTTACTTTCACGGTCACCAAAGATGGCCTAATTAGCTTAGGCCCGTTAGACGTGCGAGGCTACCATATCGGTAGTCTTAAACTTGAAAAGGGCGACAAGACTACCCCCTGGGTTCCGTCGTCGGAAGACCGTTACAAGAATACGGGCGAACAGTTAAGCATGATTAACATTGACGCGGGAAATATTTTATTCAAGTCTAATAAAATTTTCATGGACGCCGCTAGCACGGTATTTAGTGGGAAGGCGTTCATTCCGGACGCGGCGATTAGTAACCTAACAGCGGACAAAATCACCACTGGGACGCTAAATGCGGGACTATTGAACGTCATTAATGTTAATGCGAACTCAATCACCACTGGGAATATCAAGGGGCCAAACCTTGATATCAATCTCGCCACCGGGGAGGTTATCTTTGGTCGTGGGAGAATTCACGACACCTCGGACGCGATCGATATTAACGTGGACCAACGCTATATCTCGACCGCAAGTGGTAGCGCTCGGGTCATGCTAAAAAATGGGGAAATGCAACTAATCGAACCTACTCTCTTCGATCTATCTACCGACCCCTATCTTAGGATTAGTAACGCGGTAAGCGGGACCGCTTTTAGTGGCGGTGTTATCGAAGGGCGAAAAACAGCCGTAATCACGAACAAAGATAACAACGCCTGGGCGTTCAGCACCCCTATCGGCACAATGAACTTCTCCGGCCTTTCAACTGGACAAAGTTATAACGGTTCCTGGCTACCGACCATCATTGGTGGCGCCGACCGGGGGGTATTTATCTCCGGGGGACAGGCGTTTGATATGGGCAACATATCGGCTTCCCCGTATATCCAAATTGGAACCAGAGAGCCCGGCGGTAGTTACTGGTCGGACCGGGTGGTTATTGATGGTGCCTTTGTTCATATTCCCTCGACGTGGCGACGAACCACTTCGGGCGGGGCGAACGTCGTAATTAACCCGGACGGGGCACTAACCCGGGTCGCTTCTGCGACAAAATATAAAACTGATATCCAACGGTCTTACGTATCTGAATACGGTGAACGTTTGTTAGGCTTACCCACTGCGACATGGATAGATAAGGCGGAATTAAAACGGTATAATGAAGGTGAAAGCCAAACTAAACCGACGCGGTACTTCGGAATGATTGCCGAAGACCTCGCGGACGCGGGGCTTGAAATGCTAGTACAGCGGAACCTGGAAGGAGGCCTAGAAGGAATCGAATACGACCGAATCGGCGTCGCGTTGATTCCGGTTATTAAACAGTTAAAAGACAAGGTGAAGGAACTGGAGGATAAATTAAATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8e1ea6916767dd33c1da4ea44e35a61b72c9d4b19b569977c427b3b572c87c8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50