Protein

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Genbank accession
XRA41548.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVNTIADAIFCTPYRRGADILLDFERPRIGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNTKEVITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNTLKKISVSFSATEEGIFALPNRAVSVVKGSRMSTYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKRRDGGVQSVKVTPGAHDRQVIMAEVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSDGFDSGFN
Physico‐chemical
properties
protein length:312 AA
molecular weight: 35063,88630 Da
isoelectric point:6,25021
aromaticity:0,11538
hydropathy:-0,51122

Domains

Domains [InterPro]
NF040662
Unmapped
1–292
NF040662
DC_0016
STR
1–312
DC_0016
XRA41548.1
1 312
Architecture
STR
STR 1-312
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA41548.1
1 312
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,6783
Central domain 158 301 145 0,4696
C-terminal 302 312 10 0,0819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-301
C-terminal
302-312

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SLAM_phiST1J3
[NCBI] 		3384965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA41548.1 [NCBI]
Genbank nucleotide accession
PP998226 [NCBI]
CDS location
range 26393 -> 27331
strand +
CDS
ATGGATAAGTTGCTTGCTGTACAAAAGGAAATAGAGGATTACTTCGGCGACAAGCAAGCAGGGGAATTCTGTTACACCTTTGATGATTATAAAACAACGATGCAGGATATCGTCAACACTATTGCCGATGCTATTTTTTGCACGCCATACCGTAGAGGCGCCGACATTCTGCTTGACTTTGAGAGGCCTCGAATTGGGCCGGAAATGGTGTTTACGCACCGCAGTAAGGCAGGAACCTCAGAAAAATGGACAAGAACCTTCAATGACGCACAGGTTTTTGACAGTTTAAAATTCTCTTACATAGACCCAAAAACTAACACTAAAGAGGTGATAACAATCCCTGAAACTGGCGGTTTGAAGACTGAAACATACGATTCGAAGGGGATACGCAACTATAAGCAGGCTTTCTGGGCCGCAAACAGACGACACCAGAAAAACACTCTTAAGAAGATTTCGGTATCGTTTAGTGCCACGGAAGAGGGGATATTTGCACTACCAAACAGGGCCGTCAGCGTAGTGAAAGGCTCCAGGATGTCGACCTATGACGGCTACATAACGGCGGTAAACGGCCTCACTGTGGAGCTGTCACAGCCTGTTAAATTTACGTCCGGAGACGACCACTCTCTTGTTCTCAAGCGGCGAGATGGTGGCGTCCAAAGCGTCAAAGTCACACCAGGTGCGCACGACAGGCAGGTGATTATGGCGGAAGTCCCCCAAGAGGCAATATACACCGGCAACAGCGCTTTAAAAACTGAGTTTTCATTTGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACGGTAGATCCTGGCGACGACCGAACAGTTAAAATAACAGGGTTTAACTACGACAAGGACTTCTACAAATTTGATAATGTGCCGCCTTTTGGTCGCGCATTCTCGGATGGGTTCGATAGCGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7cc7df622b286654c9ef53e29876255b438993667ff902119c0895f68d9fb2a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50