Protein

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Genbank accession
YAF81177.1 [GenBank]
Protein name
host specificity tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MAVEGPWVGWSARVQTGDPWMGGAAQRLRMGIPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSRDVPLFFMYGDTPNEYVQLNIIGGAHMWGRGGQGGWTHSGGYGNGQQGGHCIQNDIGGRLRINNGGVICGGGGGGGGIAYRPHSGANWQDIGGGGGRPFGPGGGGGYSGGAASYDGPGGGYQYGNAHSGQGGDAGGNGQNAWSNGGKVLKVGAGGAAGYAVIGSAPTWQNVGVIYGPRV
Physico‐chemical
properties
protein length:264 AA
molecular weight: 26936,38500 Da
isoelectric point:8,46813
aromaticity:0,10985
hydropathy:-0,31894

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–139
DC_2135
YAF81177.1
1 264
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-139 | RBD 140-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SAEN100P08
[NCBI] 		3459911 Viruses >
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF81177.1 [NCBI]
Genbank nucleotide accession
PX104389.1 [NCBI]
CDS location
range 64262 -> 65056
strand +
CDS
ATGGCAGTTGAAGGACCGTGGGTAGGATGGTCTGCGAGGGTACAAACTGGAGACCCTTGGATGGGTGGTGCCGCGCAGAGATTGAGAATGGGAATTCCGTTTTGGATGAGTAATATGATAGGTCGATCTGTTGAAGTAATTCACACACTTGGAGCGGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATTACCGGAAATTTGGTATCATATTCTAGAGATGTTCCTTTATTCTTCATGTACGGAGATACACCGAATGAATATGTTCAATTAAATATTATTGGGGGCGCTCATATGTGGGGTAGAGGTGGACAAGGTGGATGGACTCATTCCGGTGGATATGGTAATGGACAACAAGGCGGGCATTGTATTCAAAATGACATTGGCGGACGATTAAGAATTAACAACGGTGGAGTAATTTGCGGTGGAGGTGGAGGTGGAGGTGGTATCGCTTATCGTCCTCACTCTGGCGCAAACTGGCAAGATATTGGTGGTGGCGGTGGAAGACCATTTGGCCCAGGAGGTGGCGGCGGTTACTCGGGTGGCGCAGCTTCATACGACGGTCCAGGAGGTGGTTATCAATACGGAAATGCTCATTCTGGCCAGGGTGGCGATGCCGGAGGAAATGGACAAAATGCCTGGTCGAATGGCGGTAAAGTTCTAAAGGTTGGTGCAGGAGGAGCAGCAGGTTATGCTGTTATAGGATCCGCTCCAACATGGCAAAATGTTGGAGTAATATATGGTCCAAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
822b00154491c33330b5b1a5155e7e15aa8ff7895e724dff4e3d56c03ba72d22
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank