Protein

View in Explore
Genbank accession
XWX33373.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKYVNVKQDGYLGININNDTRVINGYMLSGGVGEQDIVIHESVLPSNFYDEFIVGKFKYYRETGEVIEDYNFIPS
Physico‐chemical
properties
protein length:75 AA
molecular weight: 8617,55180 Da
isoelectric point:4,53435
aromaticity:0,14667
hydropathy:-0,29200

Domains

Domains [InterPro]
DC_0295
STR
2–75
DC_0295
IPR021358
STR
14–73
IPR021358
XWX33373.1
1 75
Architecture
STR
STR 2-75
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage PG-2021_40
[NCBI] 		2815627 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mammaliicoccus vitulinus
[NCBI] 		71237 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XWX33373.1 [NCBI]
Genbank nucleotide accession
MZ417333.1 [NCBI]
CDS location
range 71376 -> 71603
strand +
CDS
TTGAAATATGTAAATGTAAAACAAGATGGATATTTAGGTATAAACATTAATAACGACACTAGAGTAATAAACGGTTATATGTTATCCGGTGGTGTAGGTGAGCAAGACATAGTTATTCATGAAAGTGTCTTGCCTTCTAATTTCTACGATGAATTTATTGTAGGTAAGTTTAAATATTATAGAGAGACGGGAGAAGTTATAGAAGACTATAACTTTATCCCATCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
214c8ed0bbf8f12fe0560ad0fa6503491770c1bd5895d59572eb503a3cddc8cd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8850
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural phage communities crosslink different species within the genus Staphylococcus Goller,P.C., Elsener,T., Lorge,D., Radulovic,N., Bernardi,V., Naumann,A., Amri,N., Khatchatourova,E., Hernandes Coutinho,F., Loessner,M.J. and Gomez-Sanz,E. 2024 — GenBank