Protein
View in Explore- Genbank accession
- CAH1070018.1 [GenBank]
- Protein name
- major facilitator superfamily protein
- RBP type
-
TSP
- Protein sequence
-
MSSFHQIEQSTYEHSTPAWGAVFVMSLCCAVLIASEFMPVSLLTPISLDLNISEGQVGQAIAISGIFAVITSLSISRVFKALDRRHIILLLTLLMIVSGIVITFAHSAALFMLGRAILGVVIGGFWAMSTSIVMRLVPPLSVPKALGLLNGGNALATTIAAPLGSFLGSIIGWRGAFFCIVPIAIVALIWQFKSMPSLPAILSAEKSKNPFALLKRPIVLYGMTGILLLFMGQFALFTYLRPFLETVTHVDATMLSILLLILGLAGLVGTFVISLILHQHVYRYLILIPLIMAVIAGAFVFGGEHLWFVAILMGFWGFIGTSAPVAWNTWLAQTLHQDAEIGGGLMVAIIQFAITLGATIGGLLYDLHGYSATFYMSATVLLFGAITAYITWRNATHVTHQ
- Physico‐chemical
properties -
protein length: 401 AA molecular weight: 43196,19830 Da isoelectric point: 8,79370 aromaticity: 0,10973 hydropathy: 1,04439
Domains
Domains [InterPro]
IPR020846
STR
14–396
STR
14–396
IPR036259
STR
15–392
STR
15–392
IPR036259
STR
15–395
STR
15–395
IPR050189
Unmapped
19–392
Unmapped
19–392
cd17324
STR
20–375
STR
20–375
cd17324
STR
22–388
STR
22–388
IPR011701
STR
26–335
STR
26–335
1
401
Architecture
STR 14-396 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
401
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 202 | 202 | 0,6090 |
| Central domain | 203 | 390 | 189 | 0,1074 |
| C-terminal | 391 | 401 | 10 | 0,9852 |
Note: Constraints were applied during segmentation.
Fixed 88 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 88 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-202
1-202
Central
203-390
203-390
C-terminal
391-401
391-401
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1070018.1
[NCBI]
Genbank nucleotide accession
CAKLQF020000001
[NCBI]
CDS location
range 268742 -> 269947
strand -
strand -
CDS
ATGTCTTCTTTTCATCAAATTGAGCAAAGCACATATGAACATTCAACACCTGCCTGGGGTGCCGTCTTTGTAATGTCGCTCTGCTGTGCAGTATTAATTGCATCTGAGTTCATGCCTGTAAGTTTACTTACCCCCATCTCTTTAGATTTAAATATCAGTGAAGGCCAAGTGGGTCAAGCAATCGCAATTTCTGGTATTTTTGCTGTTATTACCAGCTTATCGATTAGCCGTGTATTTAAGGCATTGGACCGACGTCATATCATTTTATTACTCACCCTACTGATGATTGTCTCTGGCATAGTCATTACATTTGCCCATTCTGCGGCTTTGTTTATGTTGGGTCGTGCAATCTTAGGCGTAGTTATTGGTGGTTTTTGGGCAATGTCGACATCAATTGTCATGCGACTCGTTCCTCCGCTTTCAGTACCTAAAGCACTCGGTTTATTAAATGGCGGAAATGCGCTAGCCACCACAATTGCAGCACCATTAGGAAGCTTTTTGGGTTCAATTATTGGCTGGCGTGGCGCTTTTTTCTGTATTGTTCCTATCGCGATTGTTGCACTTATTTGGCAATTTAAAAGTATGCCCTCTCTTCCTGCAATATTGTCAGCTGAGAAATCTAAAAATCCATTTGCTTTACTAAAACGCCCAATTGTACTTTATGGGATGACCGGAATTTTATTACTCTTTATGGGCCAATTTGCGCTATTTACCTATCTACGCCCATTTCTAGAAACTGTTACTCATGTCGATGCGACAATGCTATCCATTTTATTATTAATATTGGGTTTAGCAGGTTTAGTGGGTACATTTGTAATTAGTTTAATTCTCCACCAACATGTTTATCGTTATCTGATTCTTATTCCATTGATCATGGCAGTGATTGCTGGAGCTTTTGTATTTGGTGGTGAGCATTTATGGTTTGTTGCCATATTGATGGGTTTCTGGGGCTTTATTGGAACGTCGGCACCTGTTGCGTGGAATACATGGCTTGCCCAAACACTACATCAAGATGCCGAAATTGGTGGTGGTTTGATGGTTGCGATTATTCAATTTGCAATTACTTTAGGTGCAACTATAGGTGGGTTGTTATATGACTTACATGGCTATAGCGCCACGTTCTATATGAGCGCAACTGTTTTGCTATTTGGCGCGATTACTGCTTATATTACATGGCGGAATGCTACTCACGTAACACATCAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
22fea8160a7b1dc3ed5a8ca0ba81e160ca434641d58b3e376e558c0abeec44a0
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50