Protein

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Genbank accession
XLQ25823.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,51
Protein sequence
MLDKLNQPKGSTIGVLRDGRTVQQAIDDTVALPHVSQMWQKVRSAMDDVYIIIMGDSTGNETFEWVYQWAAHLSQTVKTHSIRYRLWVDGSGWHGEERMSTGTTERSIFIDNVSVPGSTERYFQGSATSNIFNSGRVYDLVLLNYGHNEGTSVPSITISAGFTEAIFACRQINPMAPIIVTAQNPRRDFPDHSARAVACWADIAGVNGLGTVLDTVRLSAGTTSTFVAPSKTCSFVMESDGINPLDVTIASIVKV
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27863,08340 Da
isoelectric point:5,64561
aromaticity:0,08235
hydropathy:-0,09098

Domains

Domains [InterPro]
DC_1550
ATT
1–40
DC_1550 DC_0332
SSF52266
STR
47–190
SSF52266
XLQ25823.1
1 255
Architecture
ATT
STR
ATT 1-40 | STR 41-245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ25823.1
1 255
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,1515
Central domain 175 244 71 0,6540
C-terminal 245 255 10 0,6585
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-244
C-terminal
245-255

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_VIPKPNMC04
[NCBI] 		3350332 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ25823.1 [NCBI]
Genbank nucleotide accession
PQ505476.1 [NCBI]
CDS location
range 39249 -> 40016
strand +
CDS
ATGCTAGACAAACTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACTGTCCAACAGGCCATTGATGATACGGTGGCACTACCTCATGTTTCCCAGATGTGGCAGAAGGTTCGCAGCGCAATGGACGATGTGTATATTATCATCATGGGAGACTCTACAGGGAACGAGACGTTCGAGTGGGTGTACCAGTGGGCCGCGCACCTTTCGCAGACAGTCAAGACCCACTCCATCCGGTATCGCTTATGGGTAGATGGCTCAGGGTGGCATGGAGAGGAGCGGATGAGTACTGGCACCACCGAGAGGTCTATCTTCATCGATAACGTTTCTGTTCCGGGCAGCACTGAGCGTTACTTCCAAGGGTCAGCTACCAGTAACATCTTCAACTCGGGCCGTGTGTATGATTTGGTTCTCCTCAACTACGGGCACAACGAAGGGACCAGCGTTCCGTCCATCACCATTAGTGCCGGGTTCACCGAAGCAATCTTCGCTTGTCGCCAGATTAACCCGATGGCTCCTATAATCGTCACAGCACAGAACCCTCGACGGGACTTCCCTGACCACTCTGCCCGCGCGGTGGCTTGTTGGGCCGATATAGCTGGTGTAAATGGGCTTGGTACGGTTCTAGATACTGTTCGTCTATCCGCCGGGACCACGAGTACGTTTGTGGCACCGTCTAAGACCTGCTCGTTCGTAATGGAGTCCGACGGTATAAACCCGCTCGATGTAACCATCGCGTCCATCGTTAAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
232eb9e176a9309c7b163c3e07b23c858519a005126afec568c2136a4c5ea3e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50