Protein

View in Explore
Genbank accession
XCO40474.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNNGILEIGTIDDGVETIQFVQRGAGNVEARKLVLLDGSGNTTLPGDLRLSTNKTVKINSGSNLVLEMGVGSNDAYIKNQRGTGVLQLTNDSNLTFRNSQVYYAMDGRGPGKSGTLLTNVENNRQAWQYTISAATAGTPRWVKVATMKHPGDASSQLDLMITGGIDSGHGKHYVDFITLSGRNLTSWSTSNLDNWVEWRRVGSPSKTNVPEYYVVKNDAATDADASFDFYVKVPRYGNGLYVTVLNTAGYNGQDSGKVIIYETGQDTGATAPSGSILVSMKQIFDSYSKPDFSDTTGTLPVNRGGTGATNVGDARNNLGLRTAAVRDVGESNGNVMEVGAFGVGGAGKSIVDITSDVDLMNRLKAIGGTTFRANVKTVNGKAEYTGSPYYSHGAGFFSRTGDTMSALNIDYSSGNVRVFAINDRGLADGKVNYNMLYGTANKPNADDNDFVSKSRGGTYDASITINGDITANTVSGRVLKLSGGGASFVPPSQGAYVSWNKENGAGRTDFINHRSTSANVQGGFDFWNYEGNTSNMRHLAQIRNTGDLVLFPSDISKAVTFQTDGNIVGGTLFGGNLNNYLSNLTGTANSKVSKSGDTMTGRLNVYQSDTNAGAQAIYIKGVQHTPVVLERNTDANLSIAFRLTGVNPILQRKLGLAKDGTLRWGTGDNQTNNALVFDQNSIGMVRVNMDSGYLGPEVAEDIGGRTLSIDDLFLDSNDVGTRRVYSCLAQGPGANITGMPPALTNLQGDFILIVEKMRSAAGVDFRNKQTFISGRNNKTYFRYGAGTGTTSATAVNWTPWEEVITTSNTNGILPISSGGTGANNANDARNNFNLGLGQTATFGGLIVNGVGNNDPAITFKNGARIREGQGNGIGALILSASSSTDSKYLALRPYGDNSSVDIKVKANGSSEALLEWSYGPGIRSNSIGAFVIYAKTGQALHLRPNGDSSNQATVIDQNGKMTVGGEFEAQNSKITGNLNVSEDNRMIVLGKNSDIGLVKKSGMPGKMAIGKSNSFTVMVSTNTNNQINPADTFNDIFKVDADGNQTVYGNAQVNRQLTVSSSATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGIVTGPLNITGNQLKTTSLWVTGNSALNGNLEVGGNVVSNTGIGSFVGAVDVKAPAVDNGTTHLWFRHSNGGERGVIYMPGNNNTMMGLRAGGSEWQLDGPTGQMIGPGARWRIHADGNLQGDVYGGYITNYINDRFNQCAQWVRTGAQQDFGPIGRPAPGKTVPGGWVLVGLNGNSNEANQNMQLIGGRLQVWKPGVQWVDSAT
Physico‐chemical
properties
protein length:1446 AA
molecular weight: 152877,79200 Da
isoelectric point:7,21249
aromaticity:0,07261
hydropathy:-0,34661

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40474.1
1 1446
Domain Start End Length (AA) Confidence
N-terminal 1 770 770 0,1492
Central domain 771 985 216 0,3258
C-terminal 986 1446 460 0,6531
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-770
Central
771-985
C-terminal
986-1446

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146043
[NCBI] 		3232222 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40474.1 [NCBI]
Genbank nucleotide accession
PP889492.1 [NCBI]
CDS location
range 57612 -> 61952
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGGGTTCCTTTCTTAGATACCTCCGGAACTCTTAGCGTTGATGGAACTACTACATTAAAAGACAACGTAACTATTTCTCCGAATAAAGCAATTAGTTTTGAAACTACTGATTTGAGCGGTGAAATAACTCGTCACATCGTTGGCAAATGTGCTACTAATGATGGCTGGTACATTGGTGCCGGCGGTACAAGCAACAATGGTATTCTTGAAATCGGTACTATTGATGATGGCGTTGAAACCATCCAGTTTGTACAACGCGGTGCGGGCAACGTCGAAGCCCGAAAATTGGTCTTGCTTGACGGCTCGGGTAATACCACTCTTCCAGGTGATTTAAGATTATCTACCAATAAGACTGTTAAAATTAACAGTGGAAGCAACCTTGTCCTTGAAATGGGTGTAGGCTCTAACGACGCTTACATTAAAAACCAGAGAGGCACTGGTGTTCTTCAATTAACCAATGATAGTAACCTGACGTTCAGAAATTCCCAGGTTTATTACGCTATGGATGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACAAATGTAGAAAACAACCGTCAGGCATGGCAATACACTATTTCTGCTGCAACCGCTGGAACTCCACGTTGGGTTAAAGTAGCTACAATGAAGCATCCAGGAGACGCGTCTTCACAGCTGGATTTAATGATTACTGGCGGCATTGATTCTGGACACGGCAAACATTATGTTGATTTTATCACGTTATCTGGTCGTAATTTAACATCCTGGAGCACCAGCAATTTAGATAACTGGGTTGAATGGCGTCGAGTCGGTTCTCCGTCTAAAACAAATGTTCCAGAGTATTACGTCGTTAAAAATGATGCTGCTACTGATGCTGATGCGTCATTTGACTTTTACGTTAAGGTTCCTCGATACGGCAATGGACTTTATGTTACAGTGTTGAACACTGCTGGATACAATGGCCAAGATAGCGGTAAAGTAATTATCTACGAAACTGGCCAAGATACTGGTGCTACTGCACCATCTGGAAGCATTCTTGTTTCAATGAAACAGATTTTTGACAGTTACTCAAAACCAGATTTCAGTGATACTACCGGTACTCTTCCGGTTAACCGCGGTGGTACAGGTGCTACTAACGTAGGAGACGCTCGTAACAACCTGGGCCTTAGAACTGCGGCTGTTCGTGATGTTGGTGAATCCAACGGAAACGTGATGGAAGTTGGTGCATTTGGTGTTGGCGGCGCCGGAAAATCAATTGTTGATATTACATCCGATGTCGATTTAATGAATCGCCTTAAAGCTATTGGTGGTACAACATTTAGGGCTAACGTTAAGACAGTAAATGGGAAAGCTGAGTATACCGGGTCTCCTTATTATTCGCATGGAGCAGGATTCTTTTCTAGAACCGGCGATACAATGTCTGCCCTTAATATCGATTATTCATCCGGTAATGTCAGAGTATTTGCTATAAATGACCGCGGATTGGCAGACGGTAAAGTAAACTATAACATGCTCTACGGTACAGCAAATAAACCTAATGCTGATGATAACGACTTCGTATCTAAATCTCGTGGCGGTACTTATGACGCAAGTATTACAATTAATGGCGATATTACTGCCAATACTGTCTCAGGTAGAGTATTAAAACTGTCTGGAGGCGGCGCATCATTTGTTCCTCCATCCCAGGGTGCTTATGTATCTTGGAACAAAGAGAACGGAGCAGGTCGTACCGATTTTATTAATCACCGTTCAACTTCTGCAAACGTTCAAGGCGGATTTGATTTTTGGAACTATGAAGGTAATACTAGCAACATGCGTCATCTGGCGCAAATTAGAAACACCGGGGATTTAGTATTATTCCCTTCTGACATATCTAAAGCTGTGACGTTCCAGACTGATGGAAACATCGTTGGTGGTACTTTATTCGGTGGAAACTTAAACAATTACTTAAGTAATTTAACCGGAACTGCTAATAGCAAAGTATCCAAATCGGGCGACACCATGACCGGTAGATTAAACGTCTACCAATCTGATACAAATGCTGGAGCCCAGGCTATATACATTAAAGGCGTTCAGCATACACCGGTAGTTCTTGAAAGAAATACCGATGCAAACTTATCAATAGCGTTCAGATTAACTGGTGTTAATCCAATTCTTCAACGTAAACTTGGTTTAGCTAAAGATGGAACTCTTCGTTGGGGAACCGGTGATAACCAGACGAATAATGCTTTAGTATTTGATCAAAACAGCATTGGAATGGTTAGAGTTAATATGGACAGTGGTTATCTTGGCCCGGAAGTTGCTGAAGACATTGGTGGAAGAACTTTATCTATCGATGATCTTTTCTTAGACTCTAATGATGTCGGCACTCGTAGAGTATATTCGTGTTTAGCTCAAGGACCTGGAGCAAATATTACTGGAATGCCTCCTGCGTTAACTAATCTGCAAGGTGATTTCATTCTTATCGTTGAAAAGATGAGATCAGCAGCTGGTGTAGATTTCCGTAATAAACAAACGTTTATATCTGGACGTAATAATAAAACCTACTTTAGATATGGTGCTGGAACAGGAACTACTTCTGCGACTGCTGTCAATTGGACGCCGTGGGAAGAAGTAATAACTACATCAAACACTAACGGTATTTTACCAATTTCATCCGGCGGTACTGGAGCCAATAATGCTAATGATGCCCGCAACAATTTTAACCTAGGTTTAGGCCAAACTGCCACTTTTGGTGGATTAATTGTTAACGGTGTTGGAAATAACGATCCGGCTATCACATTTAAAAATGGCGCAAGAATACGAGAAGGACAAGGCAATGGTATTGGAGCTTTGATTTTGTCAGCTTCTTCATCCACTGACTCAAAATACCTTGCATTGCGCCCTTACGGTGATAACTCTAGTGTTGACATTAAAGTAAAAGCCAACGGCTCGAGTGAAGCATTGCTTGAATGGTCTTATGGCCCGGGTATTCGTTCAAATTCAATTGGCGCTTTTGTTATCTACGCAAAAACTGGACAGGCACTTCATTTAAGACCTAACGGTGACAGCTCGAACCAAGCTACAGTTATCGATCAGAACGGTAAAATGACAGTCGGTGGTGAGTTCGAGGCGCAGAACTCGAAAATCACAGGCAACTTGAACGTTTCTGAAGATAACAGAATGATCGTTCTTGGCAAAAACTCTGATATTGGTTTAGTCAAGAAAAGTGGTATGCCAGGAAAAATGGCTATCGGTAAATCTAACTCGTTTACTGTTATGGTATCAACCAATACCAATAACCAAATTAATCCTGCTGACACGTTTAACGACATATTCAAGGTAGATGCTGACGGAAACCAAACAGTTTACGGAAATGCCCAAGTTAACAGACAGTTAACTGTTTCTAGTTCAGCAACTGTTAATGGTATTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACACAGAATAACCAAGCCACCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAATGCTGGTGATACTTATCTTCCGCTAGCAGGTGGTATTGTAACTGGTCCATTAAATATTACTGGAAACCAGTTAAAAACCACATCGCTCTGGGTTACTGGAAATTCGGCACTTAACGGTAATTTAGAAGTAGGCGGTAATGTTGTTAGTAATACTGGTATTGGTAGTTTTGTTGGTGCTGTAGATGTTAAGGCCCCTGCCGTAGATAATGGTACAACGCACCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGTGTGATTTACATGCCAGGTAACAATAATACCATGATGGGATTAAGAGCTGGCGGTAGTGAGTGGCAATTGGATGGTCCGACAGGTCAAATGATAGGCCCAGGTGCTCGTTGGCGTATTCATGCAGATGGTAACCTACAGGGTGATGTTTACGGTGGTTATATCACTAACTATATCAACGATAGGTTTAACCAATGTGCACAGTGGGTTCGTACTGGTGCTCAACAAGACTTTGGTCCAATTGGTCGTCCAGCACCTGGTAAAACTGTTCCTGGTGGTTGGGTGCTTGTTGGTCTTAACGGTAACAGTAACGAAGCTAACCAGAATATGCAACTTATCGGTGGACGTTTACAAGTATGGAAACCGGGCGTTCAATGGGTTGATTCTGCTACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5c8d6130e4fcbcde5b82f90ffbb3618dd85a2e6d0dd7ef67272c49b53d90fe59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4976
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank