Protein

View in Explore
Genbank accession
QNJ55119.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSSINIPGFGYSAVPESPNDGQLYGRRNATWELIALSDGVLEAPADGQEYVRKDFQWVLPTYPTYTANDITLTSTLLDSINVHDALEELYYNDPLNVVYVRSEADLPSPQLINGVLTHKLEGKEYVIDGDVDISNALGFPGPGISATIKAVNRSVLTYTGTDAMFHDLGAQGNIEIAGQTEFNAPNADMFNLISGAGGFSFQSRYADRFNNCASLGEVYCGGLSTIVFNNGTFRNFNQGLIVHDPGFFEVNTFFVFGNNQAGCTYFTVQGTSSTGSINIDTVTCSLGTNETIFNFDPNIQDTIDTINVRNCTLRGPLNGTIFAPGSLTPRDYKFESIGNTLIGNTVHGGLLSLTDNATPTIVGAVNTPTLAAGTWVVQETSHFSATTAGRLTSQVIRTISTSIDASVSVQPSSGNGVVIRCYLAINGVPIIGSAKTTTADNGKAGNLSLSWQLDVSEGDYIELYVENRTGSTSIIVSDATLRIP
Physico‐chemical
properties
protein length:484 AA
molecular weight: 51701,80580 Da
isoelectric point:4,42625
aromaticity:0,09091
hydropathy:-0,04236

Domains

Domains [InterPro]
G3DSA:6.20.230.10
ATT
13–35
G3DSA:6.20.230.10 G3DSA:6.20.230.10
DC_0529
STR
56–484
DC_0529
QNJ55119.1
1 484
Architecture
ATT
ATT
STR
ATT 13-35 | ATT 39-61 | STR 62-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNJ55119.1
1 484
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,9590
Central domain 119 346 229 0,9793
C-terminal 347 484 137 0,9912
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-346
C-terminal
347-484

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValM_R11Z
[NCBI] 		2759335 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ55119.1 [NCBI]
Genbank nucleotide accession
MT612989.1 [NCBI]
CDS location
range 116283 -> 117737
strand -
CDS
ATGTCAAGTATTAATATACCTGGCTTCGGCTATTCTGCTGTACCTGAATCACCAAATGACGGTCAGCTATACGGTAGACGAAATGCCACATGGGAGTTAATCGCTCTCTCAGATGGTGTACTTGAAGCACCTGCCGACGGGCAAGAATACGTAAGAAAAGACTTTCAATGGGTTTTACCAACGTACCCGACATATACAGCAAATGACATTACATTGACATCTACGCTATTAGATTCAATTAACGTACATGATGCACTTGAAGAGCTTTATTACAACGACCCGCTAAATGTTGTTTACGTTCGAAGTGAAGCCGATTTACCTTCACCTCAGCTAATCAACGGGGTTCTTACCCATAAACTCGAAGGGAAAGAGTATGTAATTGATGGTGACGTTGATATATCGAATGCTCTAGGGTTCCCGGGACCGGGCATCAGCGCGACAATCAAAGCAGTCAATCGTTCAGTGCTAACTTACACAGGGACAGATGCAATGTTCCACGATCTAGGCGCTCAAGGAAACATTGAAATTGCTGGTCAGACTGAGTTTAATGCGCCGAATGCTGATATGTTCAATTTGATTTCAGGTGCAGGTGGGTTCTCGTTTCAGTCGAGATATGCAGACCGATTCAACAACTGTGCAAGTCTAGGTGAGGTTTATTGTGGTGGTCTTTCGACTATCGTGTTCAATAACGGTACATTTAGAAACTTCAATCAGGGATTAATTGTTCACGACCCTGGCTTTTTCGAAGTTAATACGTTCTTCGTGTTTGGTAATAACCAAGCAGGTTGTACTTATTTCACTGTACAGGGTACATCGTCAACTGGTTCAATTAACATAGATACAGTTACGTGTTCACTAGGTACAAACGAGACGATCTTTAATTTCGACCCGAACATTCAAGATACGATTGATACAATCAACGTTCGCAACTGTACGTTACGCGGTCCATTGAACGGTACTATATTTGCACCGGGAAGTTTGACGCCTCGCGATTACAAATTTGAAAGTATCGGTAACACACTAATCGGTAACACAGTACACGGTGGCTTGCTGTCACTTACAGATAATGCAACGCCTACAATTGTTGGTGCTGTCAATACACCGACTTTAGCAGCGGGAACATGGGTTGTACAAGAAACATCACACTTCTCAGCAACGACGGCTGGTCGCTTAACGTCACAAGTAATAAGAACAATTTCGACTAGCATAGATGCATCTGTAAGTGTACAACCATCGTCAGGTAACGGTGTTGTGATTCGATGCTATCTCGCTATTAACGGTGTTCCTATCATAGGGAGCGCGAAGACGACGACTGCTGATAATGGCAAGGCTGGTAACTTGTCTCTTTCATGGCAATTGGACGTTTCAGAGGGTGATTACATTGAATTGTATGTTGAGAATAGAACTGGTTCGACATCAATTATCGTATCTGACGCAACGTTACGCATCCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba863232645c69d080525aaf5bb6f090a86174647882ca67ce8b608fb093fd30
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50