Protein

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Genbank accession
QPZ53661.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIKPNNNTLSAITALPTAISTGKVLQVVQATDSTTFTSTSSSYAASGDIISITPSATSSKILIFFSYNVWRGGHNGNIFGKIYRDINGGGYSEVESSGRGLHQNNGYVGTTPILQKCSMTYLDSPNTTSQVNYQTYFRNESTSNTFEVGEGGGHTTAMQVMEIAG
Physico‐chemical
properties
protein length:167 AA
molecular weight: 17756,44670 Da
isoelectric point:6,25640
aromaticity:0,08982
hydropathy:-0,22635

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53661.1 [NCBI]
Genbank nucleotide accession
MW273925.1 [NCBI]
CDS location
range 11903 -> 12406
strand -
CDS
ATGGCAATAATTAAACCAAATAACAATACATTATCTGCAATAACAGCTCTACCAACAGCTATTTCTACTGGTAAGGTTTTGCAAGTTGTTCAAGCAACTGACAGCACAACTTTTACATCTACTTCTAGTAGTTATGCAGCATCTGGTGATATTATTTCTATTACTCCATCTGCAACAAGTTCTAAAATTTTAATTTTTTTTAGTTATAATGTTTGGAGAGGTGGACATAATGGAAATATTTTTGGAAAAATATATAGAGATATTAATGGTGGTGGTTATTCAGAAGTAGAAAGTTCAGGTAGAGGATTACATCAAAATAATGGATATGTAGGAACTACTCCTATTTTACAAAAATGTTCTATGACATATCTTGATAGTCCAAATACAACATCACAAGTTAATTATCAAACTTACTTTAGAAATGAATCTACAAGTAATACTTTTGAAGTTGGAGAAGGTGGTGGTCATACAACAGCAATGCAAGTAATGGAAATAGCAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e524110c6d2db273e1a2fe1c1e7afe2b2d96d6072faea3e036bac3b85170d509
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank