Protein

View in Explore
Genbank accession
WIK99940.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKFRLVKLTAISSYSNENISFAVEYKKYFFSKWKQYYKTNWVCNDRPYSWKSDLEKCQKLLSTLKERGTTHIKTVIGK
Physico‐chemical
properties
protein length:78 AA
molecular weight: 9397,81250 Da
isoelectric point:9,79141
aromaticity:0,16667
hydropathy:-0,68718

Domains

Domains [InterPro]
IPR059658
STR
1–78
IPR059658
WIK99940.1
1 78
Architecture
STR
STR 1-78
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GADU22
[NCBI] 		3050704 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. DH10B
[NCBI] 		316385 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIK99940.1 [NCBI]
Genbank nucleotide accession
OQ944321.1 [NCBI]
CDS location
range 17730 -> 17966
strand -
CDS
ATGAAATTTCGTTTGGTAAAGCTCACAGCAATTAGTTCTTATTCTAACGAGAACATCTCATTTGCTGTAGAGTATAAGAAATATTTTTTCTCTAAATGGAAACAGTATTATAAGACAAATTGGGTTTGTAATGATAGACCATATAGTTGGAAATCTGATTTAGAAAAATGCCAAAAATTACTTTCCACTCTTAAAGAACGTGGAACAACTCATATTAAAACTGTAATAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9402874e23274080c79f1c3d77d98233f92a7866547e47b8bbb77e8a91a61a1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7531
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Klebsiella phage GADU22 from urine sample of a patient with urinary tract infection Salih,H., Yilmaz,U.I., Karaynir,A., Basgoz,B.B., Bozdogan,B. and Hosbul,T. 2024-01-18 — GenBank