Protein

View in Explore
Genbank accession
YP_010112398.1 [GenBank]
Protein name
VOG4599
RBP type
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MIQIIDNFEHRSKLPNFTRDQFTTLEDMKNVRDEDIDEGHISYCISTDKHYKFNVGNVADELTGKWREFKGEKGDKGEDGKPGTSVPSNLTAFVFKSSESEPSKPVGGSWNLDTNIFTPPIGWYTTDQDMVGTIWMSWAVFQTDGSILGEWSTPIRLTGENGKDGQDGKSIEFIYKTSNRTPTSADKPSSVNVDGNVPEGWTNNPTGITEGTPYEWMCNRIKTEDVWSDWNGPTVWAKWGANGKDGDGVEYIYKRTITNVSPDRPTEVSQEDEFVPDGWTDDPTGVNEDNMYEWVCVRKYRDGFWGEFSNPALWAKWGEKGEPGKDGNDGTSVNIKGELESTTDLPESAQPGDAYVINGDLYVWDGTKWNNIGGIKGPAGDSAYVHIAFADGVETDDEGIVTIVYGFTTTGSVIGKAYIGTYADHTVADSLDPLAYKWLKNKGDKGDTGEPGKEGPQGVQGPVGPDGKTYYTWIRYAEDSNGTGISNNPDGKSYIGLAYNKETATESNDPDDYTWSKITGEDGVPGPAGEDGKTLYTWIKYADTMPTSSSSTIYDVPNESTKYIGIAVNKETASEGTDPMEYTWSLFRGADGTNGTNGKDGRDGRITYPAGIYDATVTYTATDTKAPYVLYGDTYYVMNVTTSWTGSQNEGKTPADDYEQNGEHATWIPMEKFEAVYAKLLIADNGTLGKFVFNGNYMFSQEGVNSDGDSSNNYEDFNPDSPDSGSFLPNFYVNGLTGKVVARNAYIKGAYKEQTKLVDNSSYSYVTLGGGNISVNRSVDDIMGRGTHQHISVGSGWIYDIASAEKQWSAYTVTNISDTPLLITNYFSGCFKAFCYLGDLYYGVILPSKYSSVTLTKIRVPNNTAIDFDGISNAGYVNELVLISPNQNRVVSIVDNWTVGRVTYKMLQL
Physico‐chemical
properties
protein length:909 AA
molecular weight: 99958,26990 Da
isoelectric point:4,48132
aromaticity:0,11881
hydropathy:-0,62970

Domains

Domains [InterPro]
DC_1240
ATT
1–70
DC_1240 PTHR24637
DC_0392
STR
158–236
DC_0392 DC_1340 G3DSA:1.20.5.320 DC_1971
DC_1971
STR
451–524
DC_1971
YP_010112398.1
1 909
Architecture
ATT
STR
STR
STR
ATT 1-70 | STR 158-236 | STR 253-421 | STR 441-750 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010112398.1
1 909
Domain Start End Length (AA) Confidence
N-terminal 1 602 602 0,9937
Central domain 603 801 200 0,5598
C-terminal 802 909 107 0,9086
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-602
Central
603-801
C-terminal
802-909

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr60_1
[NCBI] 		2772082 Uroviricota > Caudoviricetes > Crassvirales > Loutivirinae > Buchavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010112398.1 [NCBI]
Genbank nucleotide accession
NC_055891 [NCBI]
CDS location
range 37984 -> 40713
strand +
CDS
ATGATACAAATTATAGACAACTTTGAACATAGAAGTAAATTGCCTAACTTTACTAGAGACCAATTTACTACATTAGAGGACATGAAAAATGTTCGTGATGAGGATATCGACGAAGGACATATATCTTATTGCATATCCACTGATAAACACTATAAATTTAATGTTGGTAATGTTGCTGACGAACTCACAGGAAAGTGGCGAGAATTCAAAGGTGAAAAAGGAGATAAGGGAGAAGACGGTAAACCTGGTACAAGTGTTCCATCTAACCTTACTGCATTTGTCTTTAAGTCTAGCGAAAGCGAACCTAGCAAACCAGTGGGTGGTAGTTGGAACTTAGATACTAATATCTTTACTCCTCCAATAGGTTGGTATACAACAGATCAAGACATGGTCGGTACTATTTGGATGTCTTGGGCAGTATTTCAAACCGATGGTTCTATTTAGGGAGAATGGTCTACTCCGATAAGATTAACTGGAGAAAATGGTAAAGATGGACAAGATGGTAAATCCATAGAGTTCATATATAAAACATCTAATAGAACACCGACTAGTGCTGATAAACCTAGTAGCGTAAATGTAGATGGTAATGTACCAGAAGGATGGACTAATAACCCTACCGGTATTACTGAAGGTACTCCATACGAATGGATGTGTAATAGAATCAAGACAGAAGACGTATGGTCAGATTGGAATGGACCTACAGTATGGGCTAAATGGGGAGCTAATGGTAAAGATGGTGATGGAGTAGAATATATTTACAAAAGAACTATTACTAATGTTTCACCGGACAGACCTACTGAAGTAAGTCAAGAAGATGAATTTGTTCCAGATGGTTGGACAGATGATCCTACAGGAGTTAATGAAGATAACATGTACGAATGGGTATGTGTTAGAAAGTATAGAGACGGATTCTGGGGAGAATTTAGTAATCCTGCTTTGTGGGCTAAATGGGGAGAGAAAGGTGAACCCGGTAAAGATGGAAATGATGGTACATCTGTTAATATTAAAGGAGAATTAGAATCTACCACTGACCTACCAGAATCAGCACAACCAGGAGACGCATATGTAATAAATGGAGATCTTTATGTATGGGATGGTACAAAATGGAATAACATTGGAGGAATAAAAGGTCCTGCAGGAGATTCAGCTTATGTGCACATAGCATTTGCAGATGGTGTAGAAACTGATGATGAAGGTATCGTAACTATAGTATACGGTTTTACTACAACTGGTAGTGTTATAGGAAAAGCTTATATAGGTACTTATGCTGACCATACTGTAGCAGATTCGTAGGATCCACTAGCATACAAATGGTAGAAGAATAAAGGAGACAAAGGTGACACTGGAGAACCTGGAAAAGAAGGTCCTCAAGGAGTACAAGGTCCTGTAGGTCCAGATGGTAAGACTTATTACACATGGATTCGTTATGCAGAAGATTCAAATGGAACTGGTATAAGCAATAATCCCGATGGTAAATCTTACATCGGATTGGCATATAATAAAGAAACTGCTACGGAAAGTAATGATCCAGATGACTATACTTGGTCAAAGATAACTGGTGAAGATGGAGTACCGGGTCCTGCTGGTGAAGATGGAAAGACACTTTACACATGGATCAAGTATGCAGATACAATGCCTACATCCTCATCTAGTACGATATACGATGTACCTAATGAGAGTACTAAATACATTGGTATAGCAGTAAATAAAGAAACAGCATCCGAAGGTACTGATCCTATGGAGTATACTTGGAGTTTATTTAGAGGTGCTGATGGTACTAATGGAACAAATGGAAAAGACGGTAGAGATGGTAGAATCACATATCCAGCAGGTATATATGACGCTACTGTAACATATACAGCCACTGATACTAAAGCACCATATGTGTTATATGGTGATACATATTATGTAATGAATGTTACTACTAGTTGGACTGGTTCACAGAATGAAGGTAAAACTCCAGCAGATGATTATGAACAAAACGGTGAACATGCTACTTGGATACCTATGGAGAAATTTGAAGCAGTATATGCTAAATTATTGATTGCAGATAATGGTACATTAGGTAAGTTCGTGTTTAATGGAAATTACATGTTTAGTCAAGAAGGTGTTAATAGTGATGGAGATAGTTCTAATAATTATGAGGACTTCAATCCAGATAGCCCTGATTCAGGAAGTTTTTAGCCTAACTTCTATGTAAATGGACTTACAGGTAAAGTAGTTGCTAGGAATGCATATATAAAAGGTGCATACAAGGAACAAACTAAACTAGTAGATAATTCTAGTTATTCTTATGTAACACTAGGTGGAGGTAATATAAGTGTAAATAGAAGTGTAGATGATATAATGGGGAGAGGTACACATCAACATATAAGTGTTGGTAGTGGTTGGATATACGATATTGCTAGTGCTGAAAAACAATGGTCGGCATATACTGTTACAAATATATCAGATACCCCTCTTTTGATAACAAATTACTTTTCCGGTTGTTTCAAAGCTTTTTGTTATCTTGGAGATTTGTATTATGGAGTGATATTACCCTCTAAATACAGTTCTGTTACATTAACAAAGATAAGAGTACCGAATAATACTGCTATTGATTTCGATGGAATATCTAATGCTGGTTATGTAAATGAGTTAGTGTTGATAAGTCCAAATCAAAATAGGGTGGTTTCTATTGTAGATAATTGGACCGTGGGAAGGGTTACTTATAAAATGTTACAACTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee4cc306ba2790b5a5bb15d751c6a4efbd4a23938e9002a6e79fb8de3b6700c2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank