Protein

View in Explore
UniProt accession
A0A8S5P4H4 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MDDVVRIIGGEERDVVKVADYSGSGNIGPRGPKGDKGDKGEQGPQGERGPVGPVGPKGDTGERGLKGENGQQGPQGLQGERGPQGPIGLTGPKGEQGDMGPRGPQGLEGAQGPRGLQGIQGDVGPRGQQGEQGPPGATGPKGDKGDPFRFSDFTAEQLLSLKGPKGEIGPQGPPGPAGANATPQTLSFNNGQLSISGGNTVTLPTTSSGGSAVESTTQKKYTYKTPKGSSWMNGESHFLFTRIGNSVVVGAKGDSWATISITPPNDQNFAKLPKRESDVNGKGGTWLIVQKPNASGTSFQGNYIIPEGFTPISSIYADLVNDNGITVGAVMFGDRDNQRLIRFHFDGKGTEARSTIPTRLLRLGVCTWVTEDDPPTKEFDKPLDGKLAISEIRKG
Physico‐chemical
properties
protein length:395 AA
molecular weight: 41108,07350 Da
isoelectric point:6,78808
aromaticity:0,05570
hydropathy:-0,73342

Domains

Domains [InterPro]
DC_0620
STR
7–101
DC_0620
IPR050149
Unmapped
27–179
IPR050149
DC_0620
STR
88–376
DC_0620
A0A8S5P4H4
1 395
Architecture
STR
STR 7-376 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctiam3
[NCBI] 		2825624 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE01966.1 [NCBI]
Genbank nucleotide accession
BK015338 [NCBI]
CDS location
range 34758 -> 35945
strand +
CDS
ATGGATGACGTAGTACGTATTATTGGTGGTGAAGAGCGCGATGTAGTCAAAGTCGCCGATTATTCGGGATCAGGCAACATTGGTCCACGTGGTCCCAAAGGTGATAAAGGGGATAAAGGTGAGCAAGGCCCTCAAGGCGAACGTGGTCCAGTAGGTCCAGTAGGACCTAAAGGAGACACTGGAGAGAGAGGTCTTAAAGGTGAAAATGGACAGCAAGGACCGCAGGGCTTACAGGGAGAACGAGGACCACAAGGGCCGATTGGATTGACTGGACCGAAAGGTGAGCAAGGCGACATGGGTCCAAGGGGTCCACAAGGATTAGAGGGTGCACAGGGTCCTAGAGGATTGCAAGGCATACAAGGTGACGTGGGTCCTAGAGGTCAACAAGGTGAACAAGGTCCACCAGGTGCTACAGGTCCAAAGGGAGATAAAGGCGACCCGTTCAGATTTTCAGACTTTACGGCTGAGCAATTACTTTCGTTGAAAGGACCAAAAGGAGAAATAGGTCCTCAAGGTCCACCTGGTCCTGCTGGTGCTAATGCAACACCTCAAACCCTTTCATTCAATAATGGCCAATTGAGTATTAGCGGTGGCAATACTGTTACACTGCCAACTACGTCAAGCGGTGGTAGTGCGGTAGAATCTACCACTCAAAAGAAATATACCTACAAAACTCCAAAAGGGTCGTCTTGGATGAACGGAGAAAGCCACTTCCTGTTTACACGGATTGGAAATAGTGTTGTTGTTGGCGCTAAAGGGGATTCATGGGCCACCATTTCAATCACGCCACCGAATGACCAAAATTTCGCTAAATTGCCTAAGCGGGAGTCAGACGTTAATGGTAAGGGTGGTACATGGTTGATCGTGCAGAAACCGAATGCTAGTGGAACATCTTTTCAAGGGAATTATATTATCCCTGAGGGCTTCACTCCTATTAGTTCCATTTATGCCGACTTAGTCAATGATAATGGTATAACAGTAGGGGCGGTTATGTTCGGCGACAGGGATAACCAAAGGCTTATTCGCTTCCATTTTGACGGGAAAGGAACGGAAGCGCGGAGTACAATCCCTACACGATTATTACGTTTGGGTGTATGCACCTGGGTAACGGAGGATGACCCTCCAACAAAGGAATTTGACAAGCCGTTGGATGGGAAGCTTGCTATTTCGGAAATTAGGAAAGGATAG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
fc601b74c39f76b6fc95ac9feeebbd0a248f9205d4b3ec3afdc739dd05859dc1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6433
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50