Protein

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Genbank accession
XLE45446.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MGASITLAGESLIAQKQGAQQPLIVSRFVLANVPGLNPNGPVDRAAPKPAAHLVASYDVTQKGFVNPSQVVYSLMMGSDIGDFDWNWIGLETAENVLLAVAYVPVQQKRKNIPPQQVGNNVTRNFLVVFDGAQALTGITVDASTWQHDFTVRLHGIDERERLSNRDIYGRACFFGSAFQVEKVGSDYRLKPGMAYVEGIRLVLPEFFPVAVPRLPSAVYLIVSLRRELSDVVASWTLGYEANQADYTDSSGTRHYCIALADLTPSQISDYRAAEPINSPLISHFAARTGDYPQLRARATTKGDVGLSNVPNAISDDYATDNSLIIATTKAVNSVRRLLQQAIDKIISGDTPAGKAKRLETPRTLSISGAGTGEAQFDGGDNATIPLTLADSGVKAGTYPKVQVNAKGIVVGAQALSAQDIPGLDWSKITSGKPNTLNGYGITDAIHAGDYGLAGTTSPSSAIDHKDLPGGFHYFGAGYTTFSEYVGLINIPYGFSSYSGQIGLQQGTDDVKLLVRSVNKTGDWTPTRSVWHNGNFDPNTKADAATTLEGYGITNAIPTGLTNKRPQLYAPQSGDGFDRGALEIREAEAIGSGSVAAQYAPRISFHWRSVASGGLSMNAAGELLWNGRPLWHSGNGPKNTASLGDIGFWRCADTGVVLQWGTVAAHPAVAQSVSFRVAFNVVCFGVLPTTNNASGGANADSGYQIVSKSVTGFTAYRQDYNITNIGQDSGYSWFAVGF
Physico‐chemical
properties
protein length:737 AA
molecular weight: 78521,89810 Da
isoelectric point:6,20047
aromaticity:0,09227
hydropathy:-0,15020

Domains

Domains [InterPro]
DC_1466
ATT
1–184
DC_1466 DC_1329 G3DSA:2.60.40.3940
IPR022225
ATT
3–157
IPR022225 IPR054075
XLE45446.1
1 737
Architecture
ATT
ATT
RBD
ATT 1-184 | ATT 232-555 | RBD 639-737
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLE45446.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 456 456 0,8983
Central domain 457 655 200 0,0692
C-terminal 656 737 81 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-456
Central
457-655
C-terminal
656-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UFJF_PfPro
[NCBI] 		3384676 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLE45446.1 [NCBI]
Genbank nucleotide accession
PQ412991 [NCBI]
CDS location
range 24684 -> 26897
strand +
CDS
GTGGGAGCCAGCATTACCCTTGCAGGTGAAAGCCTGATCGCGCAAAAACAAGGCGCACAACAACCCCTGATCGTGTCCCGTTTTGTTCTGGCCAATGTGCCAGGGCTGAACCCCAACGGCCCGGTTGATCGTGCGGCGCCGAAGCCGGCGGCGCACTTGGTCGCGAGTTATGACGTCACGCAAAAAGGGTTCGTGAACCCTAGCCAAGTCGTCTACAGCCTGATGATGGGCAGTGATATTGGAGACTTTGACTGGAACTGGATCGGCCTGGAAACCGCTGAAAATGTGTTGTTGGCAGTGGCGTATGTGCCTGTACAGCAAAAGCGCAAGAACATACCGCCGCAGCAAGTGGGCAACAACGTCACGCGCAACTTCCTGGTGGTGTTCGACGGTGCGCAGGCGCTAACAGGCATCACCGTCGACGCAAGCACATGGCAGCATGATTTCACTGTGCGCCTCCACGGTATCGATGAACGCGAACGCTTGAGCAATCGCGATATCTACGGACGAGCTTGTTTTTTTGGCAGCGCTTTTCAGGTGGAGAAAGTCGGCAGTGATTACCGACTTAAGCCTGGAATGGCCTATGTCGAAGGGATTCGCCTGGTTTTACCTGAGTTCTTCCCAGTCGCGGTGCCCAGGTTGCCGAGCGCAGTTTATTTGATCGTATCGCTGCGCCGTGAATTGAGTGACGTGGTGGCCAGCTGGACGTTGGGATACGAGGCAAATCAGGCTGATTACACTGATAGCTCTGGCACCCGCCATTACTGCATTGCGCTGGCGGACCTGACGCCTTCACAGATCAGCGACTATCGTGCTGCAGAGCCAATAAACAGCCCGCTCATCAGTCATTTCGCCGCTCGCACCGGGGACTACCCGCAGTTGCGCGCCCGAGCAACAACTAAAGGTGACGTAGGGCTAAGCAACGTTCCTAACGCCATCAGCGATGATTACGCGACAGATAACAGCTTGATCATCGCCACGACCAAAGCGGTCAACTCTGTGCGCCGCCTGCTGCAGCAGGCGATAGATAAAATCATCTCGGGAGACACGCCAGCCGGAAAGGCGAAACGGCTGGAAACCCCCAGAACGCTATCAATCAGCGGAGCGGGCACGGGCGAGGCGCAGTTTGATGGTGGTGACAACGCCACCATCCCGCTGACACTTGCAGACAGTGGGGTCAAGGCTGGCACGTACCCTAAAGTTCAGGTGAATGCGAAAGGCATCGTAGTCGGAGCCCAGGCGCTTTCGGCCCAGGATATCCCTGGTTTGGACTGGAGCAAGATCACCAGCGGTAAGCCTAATACGCTCAACGGGTACGGCATCACCGACGCAATACATGCCGGGGACTACGGGCTGGCGGGCACTACATCGCCTTCATCTGCCATCGACCATAAAGACCTTCCTGGCGGTTTTCACTACTTTGGGGCTGGCTATACAACCTTTAGTGAGTACGTCGGCCTGATCAATATTCCCTACGGCTTTTCCTCTTATTCAGGCCAGATCGGCCTGCAGCAAGGGACTGATGACGTCAAATTGCTGGTTCGCTCGGTGAACAAGACAGGGGATTGGACGCCTACGCGCTCTGTCTGGCACAACGGGAATTTCGACCCAAACACTAAAGCTGATGCGGCTACGACACTTGAAGGCTATGGCATTACCAACGCCATTCCGACGGGGTTAACCAATAAGCGGCCCCAGCTTTACGCCCCGCAATCAGGGGACGGCTTTGATCGTGGCGCGCTTGAGATCCGCGAAGCGGAAGCCATCGGCAGCGGTAGCGTCGCCGCTCAATACGCGCCGCGAATCTCTTTTCATTGGCGTTCGGTCGCCTCCGGTGGCCTGAGCATGAACGCCGCCGGAGAACTGCTATGGAACGGGAGGCCCCTGTGGCACAGCGGTAACGGCCCGAAAAATACAGCGAGCCTGGGCGATATCGGTTTTTGGCGCTGCGCTGACACAGGTGTGGTTCTTCAATGGGGGACGGTCGCTGCGCACCCTGCTGTCGCTCAATCAGTGAGTTTCCGCGTGGCGTTCAACGTCGTGTGTTTTGGCGTTCTCCCTACTACCAACAACGCGAGCGGTGGTGCAAACGCTGACTCCGGTTATCAGATCGTGAGCAAGAGCGTGACCGGGTTTACGGCCTACCGACAAGACTACAACATCACCAACATTGGCCAAGACAGCGGCTATAGCTGGTTTGCCGTAGGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b99e453c010302b72070d93d3cc3a33607df1f7e273a905295c8f60b4ea096e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7474
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pijolavirus UFJF_PfSW6 Infection in Pseudomonas fluorescens Induces a Prophage Belonging to a Novel Genus in Peduoviridae Family Vidigal,P.M.P., Brum,J.M., Lopez,M.E.S., Mantovani,H.C. and Hungaro,H.M. 2024 — GenBank