Protein

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Genbank accession
BAD16800.1 [GenBank]
Protein name
similar to vrlC protein [Dichelobacter nodosus]
RBP type
TF
Evidence RBPdetect
Probability 0,68
Protein sequence
MPSQTVIAESYIEPKDIKVDGTATRIEWSPVFCHAGEEYAIVLLTDDSGTAVKIAELGKYDAVNSRWVTSQPYQVGVLLSSSNASTWTPHQNLDLTFRLLAAKFSEVSHIIDLGKVTANNVSDLIVLTNVEKVAFDTNVEFILTDEEGKENFLSDNLPLALRERLSGELTVKANLKGSKEKSPVLYPGLQLVMGNIGEKGDYVTRSITAGANTKITITYDALIPGTADVKAYVQKNVDWQLVNLTSGKPIGENLVERTHVLSNFNGNDTRIKLVLSGTVVYRPKVKNLRIIIT
Physico‐chemical
properties
protein length:293 AA
molecular weight: 32135,24000 Da
isoelectric point:5,67841
aromaticity:0,06826
hydropathy:-0,09113

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Wolbachia phage WOcauB1
[NCBI] 		262790 Viruses > unclassified bacterial viruses >
Host Wolbachia sp. wCauB
[NCBI] 		66070 Pseudomonadota > Alphaproteobacteria > Rickettsiales > Anaplasmataceae > Wolbachia >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAD16800.1 [NCBI]
Genbank nucleotide accession
AB161975 [NCBI]
CDS location
range 12546 -> 13427
strand +
CDS
ATGCCCTCGCAGACTGTTATTGCTGAAAGCTATATTGAGCCGAAAGATATAAAAGTAGATGGCACAGCAACACGTATAGAATGGTCGCCAGTGTTTTGCCATGCAGGAGAGGAGTATGCAATAGTGCTACTTACTGATGATTCTGGTACTGCAGTCAAAATAGCAGAACTTGGCAAATATGATGCAGTAAATAGCCGTTGGGTAACAAGTCAGCCATATCAAGTAGGAGTATTACTCTCATCTAGTAACGCAAGTACTTGGACTCCACATCAGAACTTAGACTTAACGTTTCGGCTTTTGGCTGCAAAATTTAGCGAAGTTTCTCACATTATTGATCTTGGCAAGGTTACTGCAAATAACGTATCAGATTTAATTGTTTTGACGAACGTCGAAAAAGTAGCATTTGATACCAATGTGGAATTTATCTTAACAGATGAAGAGGGAAAAGAGAACTTTTTGTCTGATAATTTGCCACTTGCACTGCGTGAAAGATTATCTGGAGAGCTAACAGTAAAGGCAAATTTAAAAGGGTCAAAAGAAAAAAGTCCGGTTCTCTATCCTGGGTTACAGTTAGTTATGGGTAATATAGGGGAAAAAGGAGATTATGTTACAAGAAGTATTACAGCAGGAGCTAACACCAAGATCACCATAACATATGATGCGCTAATACCTGGCACTGCAGATGTAAAAGCATATGTACAAAAAAACGTGGATTGGCAATTAGTAAATTTAACATCAGGAAAACCAATTGGAGAAAATTTGGTAGAGAGAACTCATGTGCTATCAAATTTTAATGGTAATGATACAAGGATAAAATTGGTTTTAAGTGGAACAGTTGTTTATCGCCCTAAAGTCAAAAATCTACGAATCATTATCACTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0eb1210780d34acfa0481eee2b6fdea1ac34dde10dc563a58a49bf2bc471abc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8826
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the bacteriophage WO from Wolbachia, an arthropod endosymbiont Fujii,Y., Kubo,T., Ishikawa,H. and Sasaki,T. 2004 15094394 GenBank