Protein

View in Explore
Genbank accession
WAB56781.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPKPDDLSVIWASIGQATKPAPNKIMTGWTNEIPPYQWHNWYFQRVDKALAHINQQGIAMWDAATTYEGGTSLAKGSDGVVYKAKRSSRGVDPVSPASNLDWEPAFERYGEAAKVNSQLQSLKKDYETLANISNIAMARQNLSVYSKAETDVRYAFKAGAAGQVFAVAPATAGSHAVPRDQLPALYPRAGAAPGIIALASQAEGYAGTVENKAIAPSVLKALTLYKSQNLADLPDKQLARANLGLASSAVLPENTWLKRNDNLADIPNKPTARSNLGLTDTATLPVGDVMRKSENLAGLTNVPQARANLGLGTMATANSGDFLTSANNLGDVRDAQAARNNLGLKGCATLDALGLPTGATGLDFQSEQSSSASGWAALPNGLILQWGQGPALYDDRSTIVRLPRQARILNVSVTVMGTFNASIGPGAYMTDQWSNTQFRVSCNWGNWAYPFCWFAITTIYGM
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49565,31660 Da
isoelectric point:8,76198
aromaticity:0,08190
hydropathy:-0,22737

Domains

Domains [InterPro]
DC_2128
STR
2–277
DC_2128 DC_0362
Coil
Unmapped
114–134
Coil G3DSA:2.60.40.3940
WAB56781.1
1 464
Architecture
STR
RBD
STR 2-277 | RBD 290-464
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_RP15
[NCBI] 		2951337 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAB56781.1 [NCBI]
Genbank nucleotide accession
ON524861.1 [NCBI]
CDS location
range 47379 -> 48773
strand +
CDS
ATGCCGCTTCCAAAACCTGACGACCTGTCCGTAATCTGGGCATCTATTGGGCAGGCGACTAAGCCTGCTCCAAACAAGATCATGACAGGCTGGACCAACGAAATCCCTCCCTACCAATGGCACAACTGGTATTTCCAGAGGGTAGATAAGGCCCTGGCCCACATCAACCAACAAGGCATCGCCATGTGGGATGCCGCCACCACTTACGAAGGGGGTACCAGCCTGGCCAAAGGGTCAGATGGGGTGGTGTACAAGGCCAAACGGTCCAGCCGAGGTGTTGACCCCGTATCTCCGGCAAGCAACCTGGACTGGGAACCCGCATTCGAGAGGTACGGTGAGGCTGCGAAAGTAAATTCCCAGCTTCAATCCTTGAAAAAGGATTATGAAACACTGGCCAATATCAGCAACATTGCCATGGCCAGGCAAAACCTCTCGGTATATTCCAAAGCCGAGACAGATGTCCGATACGCCTTCAAGGCTGGGGCAGCCGGGCAGGTGTTTGCTGTAGCCCCTGCCACAGCAGGAAGCCATGCAGTCCCAAGGGATCAGTTGCCAGCCTTGTACCCCCGAGCTGGAGCAGCACCAGGCATCATCGCTTTGGCAAGCCAGGCGGAAGGATACGCAGGCACCGTTGAGAACAAGGCGATTGCACCGAGTGTCCTGAAAGCACTCACCCTGTATAAGAGCCAGAATCTGGCGGACCTCCCGGATAAGCAGCTTGCCCGGGCGAACCTGGGGCTGGCCAGTTCTGCTGTGCTGCCGGAGAACACCTGGCTCAAGCGTAATGACAACCTGGCTGATATCCCCAACAAGCCCACAGCCCGGTCTAACCTGGGGCTCACAGACACTGCTACACTGCCTGTAGGCGACGTAATGCGCAAGAGTGAGAACCTGGCAGGGTTGACCAACGTCCCTCAAGCACGGGCTAACCTGGGTTTGGGAACTATGGCAACTGCCAACTCGGGAGACTTCCTAACCTCGGCGAACAACCTTGGAGATGTCAGGGATGCACAAGCAGCCCGGAACAACCTGGGCTTGAAAGGATGTGCTACCTTGGATGCCCTGGGGCTTCCCACAGGAGCCACAGGCCTGGACTTCCAATCGGAACAGTCCTCCAGCGCATCCGGCTGGGCAGCTCTTCCGAACGGGTTGATCCTTCAGTGGGGTCAAGGCCCTGCACTGTACGATGATCGGTCTACGATTGTCCGGCTGCCACGCCAGGCTCGAATCCTGAACGTGAGCGTAACTGTGATGGGCACTTTCAACGCCTCTATCGGGCCAGGCGCCTACATGACGGACCAGTGGAGTAATACTCAGTTCCGGGTATCGTGCAACTGGGGCAACTGGGCGTATCCGTTCTGCTGGTTCGCTATCACCACCATCTACGGGATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3874352365080546aa84ebf248c79d47d977b406da6f0bea8aa95f456d66b57f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7469
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The phenotypic and genotypic characterization of efficient bacteriophages that are isolated in our laboratory against Pseudomonas Aeruginosa strains isolated from diabetic foot infections Salih,H., Bozdogan,B. and Basbulbul,G. 2011-12-28 — GenBank