Protein

View in Explore
Genbank accession
WVX91128.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MTTKVIFTFHNPDGSPQVGKEFSVRLTRPGMNDADDCIVLPESYAMTTDDQGQFTMDLESATSAYRVSVVDDDSFEDDPCNRTSFTFYVPDSPTPVHVQELILLPPPTSLPWDEEAMNKITQAVVDAREARDEAEGHADRAEEQVDLAKAEVVKAQAEVVKAKDEVTKAQAEVAKAAQQVELAKVEVGKAGASAAAAKVSETNAANSAAGAAASATAATNQANRAKTEADRAESLANQVAEKVEGGNLPALVGMNETFTYEGGEDHYNWTRTGPVSVSQHTGFIRVSKTDASSNRAFIRKSVEFPDDHWITYFRVKTQTGTAAQNNSAQIRFLAADGKDYTVYFNINANGLVEPNTIHMQGSEGGARNAATMFTGLNTEAWMDMAVKFDAVNRHIELFRRMPNGTWQKGGGRLMVDTIKPAIIEISSMPVAPNGWWMDVDFITVCRPNLICYGDSIAAGQNEYGVTRGTADYHNNRNWAGTWFGQSSLYATNRNNLVLVQGVEGRRTWQYLDSLGEIENSGVKVVFLHASTNDHKDATMTMAKRTSDTQAIVDRLHAVGAQVVLFNAMQGTKLFNDSLAEGVTKLKAYTDQWWSEELHKVTGLGQVLDIARVVGKDGYFDPAIAADDGLHLSTASAKKIADKLGQFYSNSTSINGLAPLESPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLTMRNKTGAQMAAGGVRSGYYYVPGDSSNPLPGNNYAFVHHMSYDNNKGWELWNQCYSDRMYMRYSNNQGVWQTPVEVVTEKWMDRNSFMTPRVTAFNRLPVASAAGYEGVVPLQAGSSGAWRNLNAGSAGIGLLGAATVENALNYIGGTPKTMTSLRSYSDANAIPNECGFYGVGVAPWANLPPGVTSINPVGSTIYHQVYDASTSTQIFIPRTSDICYFRRKAAGVWSPWVRYLTDKQLVGTTTNSSTGEPNGAIMESGTTANGWYIRFADGTQMAGARTEPGLPAGANVIQLPASFVSGFNTAVTCNWIPSSNWPTNAGQGVRGAYLNSGSTVSFATAQAAGANDTIMIMAVGRWY
Physico‐chemical
properties
protein length:1063 AA
molecular weight: 115176,02030 Da
isoelectric point:5,31350
aromaticity:0,09501
hydropathy:-0,32540

Domains

Domains [InterPro]
DC_0617
ATT
1–66
DC_0617 DC_1375 cd19958
Coil
Unmapped
124–186
Coil IPR051532 DC_0857
Coil
Unmapped
215–242
Coil IPR036514
SSF52266
STR
446–644
SSF52266
cd00229
ENZ
449–646
cd00229
IPR013830
ENZ
451–634
IPR013830
WVX91128.1
1 1063
Architecture
ATT
STR
ATT 1-66 | STR 115-1063
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX91128.1
1 1063
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9923
Central domain 244 495 253 0,4738
C-terminal 496 1063 567 0,7995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-495
C-terminal
496-1063

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PJNP053
[NCBI] 		3108095 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX91128.1 [NCBI]
Genbank nucleotide accession
OR941788.1 [NCBI]
CDS location
range 22904 -> 26095
strand -
CDS
ATGACCACAAAGGTGATCTTCACCTTCCATAACCCGGATGGTAGTCCGCAGGTCGGAAAAGAGTTTTCCGTCCGACTGACCCGTCCGGGTATGAACGATGCGGATGATTGCATCGTCCTCCCTGAAAGCTACGCCATGACCACGGATGACCAGGGCCAATTCACGATGGACCTGGAGTCGGCTACTTCGGCATACCGGGTTTCCGTAGTGGATGACGACTCGTTCGAGGATGATCCGTGCAATCGCACGTCGTTCACCTTCTACGTGCCGGATTCTCCCACTCCTGTTCATGTGCAGGAACTGATCCTGCTGCCTCCGCCCACGTCTCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAAGCTGTCGTAGATGCACGCGAGGCCCGTGACGAAGCCGAAGGTCATGCTGATCGTGCCGAAGAGCAGGTAGATCTGGCCAAAGCCGAGGTCGTTAAAGCCCAAGCTGAAGTCGTCAAGGCCAAGGATGAGGTGACCAAGGCACAGGCTGAAGTAGCTAAAGCTGCTCAGCAGGTTGAGCTTGCAAAGGTTGAAGTAGGTAAGGCGGGAGCCTCTGCTGCTGCGGCCAAGGTCAGCGAAACCAATGCCGCGAATTCCGCTGCTGGTGCTGCTGCCTCGGCGACTGCTGCTACCAACCAAGCCAACCGTGCGAAGACGGAAGCTGATCGTGCCGAATCCCTGGCAAACCAAGTTGCCGAGAAGGTAGAAGGCGGCAACCTACCTGCACTGGTAGGAATGAACGAAACCTTCACCTACGAAGGTGGTGAGGACCACTACAACTGGACTCGTACCGGTCCGGTGTCTGTCTCTCAGCACACTGGTTTCATTCGTGTTTCCAAGACCGATGCATCCAGCAACCGAGCTTTCATCCGCAAGTCTGTCGAGTTCCCGGATGACCACTGGATCACCTACTTCCGGGTGAAAACCCAGACGGGTACTGCTGCACAGAACAACTCGGCCCAGATCCGTTTCCTTGCTGCTGATGGCAAGGACTACACGGTCTACTTCAACATCAATGCCAATGGTTTGGTGGAACCGAACACCATCCATATGCAAGGTAGCGAGGGTGGGGCACGTAATGCCGCCACCATGTTCACTGGCTTGAATACCGAAGCCTGGATGGACATGGCAGTAAAGTTCGATGCCGTGAACCGCCACATTGAACTCTTCCGCCGTATGCCCAATGGCACCTGGCAGAAGGGTGGCGGTCGCTTGATGGTGGACACGATCAAGCCTGCGATCATCGAGATCTCTTCCATGCCTGTCGCACCCAATGGTTGGTGGATGGACGTGGACTTCATCACGGTTTGCCGACCGAACCTCATCTGCTACGGCGACAGCATTGCTGCCGGTCAGAACGAGTACGGGGTAACCCGAGGTACTGCGGATTACCACAACAACCGTAACTGGGCAGGAACCTGGTTTGGCCAGTCCAGCCTGTATGCCACCAACCGGAACAACTTGGTTCTGGTGCAAGGTGTAGAAGGCCGACGTACCTGGCAGTATCTGGATAGCCTGGGGGAGATCGAGAACTCCGGTGTGAAAGTGGTGTTCCTGCATGCAAGCACGAACGACCACAAAGACGCCACCATGACCATGGCCAAGCGTACTTCGGACACCCAAGCCATCGTGGACCGACTGCATGCTGTCGGTGCTCAGGTGGTTCTGTTCAACGCCATGCAAGGCACCAAGTTGTTCAACGATTCGTTGGCCGAAGGGGTGACCAAGCTCAAGGCGTACACCGACCAGTGGTGGTCCGAGGAACTGCATAAGGTCACTGGTTTGGGACAGGTTCTGGACATCGCCCGTGTGGTAGGCAAGGACGGTTACTTCGATCCTGCTATCGCTGCTGACGACGGACTGCATCTGTCCACTGCATCTGCGAAGAAGATCGCCGACAAGCTGGGACAGTTCTACTCGAACTCTACTTCCATCAATGGTTTGGCTCCGCTGGAAAGCCCTGCGTTTACCGGTATTCCTACCGTACCCACGCAGACTCCTTTCCTGCCCTACGGCAAGCAGATCGCTAACACCGAGTACGTCATTACCTTCATTCAGGACTGGACCAGTAACTACGGTTACGGTGACCTGACGATGCGTAACAAGACTGGTGCTCAGATGGCAGCTGGTGGTGTGCGAAGCGGTTACTACTATGTCCCTGGGGATTCTTCTAACCCCCTGCCGGGAAATAACTATGCATTCGTGCATCACATGTCTTACGACAACAACAAGGGTTGGGAACTCTGGAACCAATGCTATTCCGACCGTATGTACATGCGGTATTCGAACAACCAAGGTGTCTGGCAAACTCCGGTGGAAGTGGTCACTGAGAAGTGGATGGATCGCAATAGCTTCATGACCCCACGGGTTACTGCGTTCAACCGCTTGCCTGTGGCTTCTGCTGCCGGTTATGAAGGGGTTGTCCCCCTGCAAGCTGGATCCAGTGGTGCATGGCGTAACTTGAACGCCGGTTCTGCCGGGATCGGGTTGCTAGGTGCTGCTACGGTCGAGAATGCGTTGAACTACATCGGTGGTACTCCGAAGACGATGACCAGTCTGCGGTCCTACAGCGATGCCAACGCCATTCCGAACGAGTGCGGTTTCTACGGTGTCGGGGTTGCTCCTTGGGCGAACCTGCCTCCGGGCGTAACTTCCATTAACCCGGTGGGTTCTACCATCTACCACCAGGTTTATGACGCCAGCACTTCTACGCAGATCTTCATTCCGCGTACTTCGGATATCTGCTATTTCCGTCGCAAGGCTGCGGGTGTCTGGAGTCCCTGGGTACGCTATCTGACCGATAAGCAGTTGGTCGGGACTACTACCAACAGCAGCACCGGGGAACCGAATGGTGCCATCATGGAAAGCGGTACAACTGCTAACGGCTGGTACATCCGTTTCGCTGATGGGACTCAAATGGCAGGGGCAAGAACTGAACCTGGTCTGCCTGCTGGCGCCAATGTGATACAGTTGCCTGCCTCTTTCGTGTCTGGCTTCAATACCGCAGTAACCTGCAACTGGATCCCCTCTTCCAACTGGCCTACCAACGCTGGCCAAGGGGTTCGGGGGGCTTACCTGAATAGTGGTAGCACTGTTTCTTTTGCTACTGCACAGGCAGCCGGGGCTAACGACACTATCATGATCATGGCCGTAGGGAGATGGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
475117787a96053259b294d121e6da4da706faeb9426cc602fddd783389f4e72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6555
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Efficient gene editing system CRISPR-Cas12a for Pseudomonas aeruginosa bacteriophages Yan,B. and Chen,Y. 2024-12 — GenBank