Protein

View in Explore
Genbank accession
AFU62970.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MFKFCDGFDHYADIGVSGTNLQDYLQAAGYTVRNASPTTFAVVAGRREGARALRFNVAQSSTVNASLSWGFSTTSNKVVFGFALKAGLSRMRIARVENIVDIEWDTTTGKLRVGEELGVNPLILNAWYYFEIEIDKTANEVKIFANNELQLTVAPSSTLTTQYTIVWGQTGTAPNAGEQTLDDFYVIDGEGSRNNARLSPIEVTSRMPTADVTTEWEVVGAGSETPHYSIVSQLSPGGESKPYLQSNTAGATDMYRSNVTLPNNNQIFAVSVVAYARKGDLDDRKLGLVVQTAGGSPTEVQVPLTESYKYYQASYETAPGGGEWNQNNVESLEFGIITR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36929,54380 Da
isoelectric point:4,79877
aromaticity:0,10029
hydropathy:-0,27257

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage Redjac
[NCBI] 		1235559 Uroviricota > Caudoviricetes > Casjensviridae > Redjacvirus redjac >
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales
Host Providencia stuartii MRSN 2154
[NCBI] 		1157951 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Providencia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU62970.1 [NCBI]
Genbank nucleotide accession
JX296113 [NCBI]
CDS location
range 8065 -> 9084
strand +
CDS
ATGTTTAAATTTTGCGACGGATTCGACCACTATGCCGACATTGGTGTGAGCGGAACCAACTTACAAGATTACCTGCAAGCCGCAGGCTATACCGTACGAAATGCATCCCCGACCACCTTTGCCGTCGTGGCTGGCCGTCGAGAGGGTGCGCGTGCATTACGTTTCAACGTGGCCCAAAGCTCAACCGTCAACGCTTCTTTGTCATGGGGATTCTCTACGACGTCGAATAAAGTGGTATTCGGTTTTGCATTGAAAGCCGGTCTCTCCCGTATGCGCATCGCGCGTGTCGAGAATATCGTAGATATCGAATGGGATACCACAACCGGTAAACTGCGAGTCGGCGAAGAACTGGGCGTTAACCCGCTTATCCTGAATGCGTGGTACTACTTCGAAATCGAGATCGATAAGACGGCCAATGAAGTCAAGATCTTCGCTAATAACGAATTGCAGTTAACCGTTGCGCCTTCCAGCACCCTGACTACCCAATACACCATCGTATGGGGCCAAACCGGTACAGCACCGAATGCCGGTGAGCAGACGCTAGACGATTTCTACGTTATCGATGGCGAGGGCTCACGCAACAATGCACGCTTGTCTCCGATCGAAGTGACCAGCAGAATGCCAACGGCAGACGTTACCACGGAGTGGGAAGTCGTCGGGGCAGGCAGTGAAACGCCCCACTATTCAATCGTATCTCAGCTATCGCCGGGTGGAGAGAGCAAACCGTACTTGCAATCCAACACCGCAGGCGCAACGGACATGTATCGTTCCAACGTTACACTGCCGAACAATAACCAGATCTTTGCCGTGTCAGTCGTGGCCTACGCACGTAAAGGCGACCTCGATGACCGCAAACTAGGCTTAGTTGTTCAAACGGCTGGCGGATCACCGACGGAAGTTCAGGTGCCATTGACCGAGTCTTATAAGTATTACCAAGCGTCGTACGAAACTGCCCCTGGCGGTGGCGAGTGGAATCAGAACAACGTAGAATCACTGGAATTCGGAATCATCACACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9dfcaf5dba9e6d1d23508ea39273af6258846bba1e5c4ed533a5e86164c7c20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8673
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced de novo assembly of high throughput pyrosequencing data using whole genome mapping Onmus-Leone,F., Hang,J., Clifford,R.J., Yang,Y., Riley,M.C., Kuschner,R.A., Waterman,P.E. and Lesho,E.P. 2013 23613926 GenBank