Protein

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Genbank accession
XYS97995.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MRETNLSFVQYTGDGTTRAFAFTVQGEDIGYFRTTDIHGYVDGEEVPILIHPSTPHMMQFYTAPARGTSILIRREMPFNRTYADFERGNNFGKRQVNNSFLQQLYLTQQLMDGFLPEGFYLKDDLDMGGHRIINLGKPRDNSDAVRLIDLKGGIKTPKGVAFLGGMTYIRLATALVSPDTEAETTVMTYNANFMPSAGRRAMLMSEAGDVVFLSADLKELTLRDKDGNAADFDISMVDLPLEAQVTFKVIFKRENGKLYVSILHGTNQSGYFTVGSFAGGFTKMFGGEDEDSPSRIIIYNQNYFYKGITNAWDYYNQTGINVQATYVEFTGTIIGQDWEAVDEDEGLIDLTVTAPKVKFDPYGTGFSQQSTDVDKVLREADQTFIRTDFIVEQPDFPDGTVLSPYRTWLANTQDAPRFRPLPADPANGVEIRVRDNSGHATTNNISIGGNGKTIMGLDEDLNMTVSWSWCTLKYFKDIDDWRVVEGGVGVQVRAAPSEEMQRMYPVGQVLLTMNPANPADYLGFGAWSRAARGLVLVGAGTGKDIEGNEKQFAIGANAGKYQHMIEMEQMPEHVHEINNHIRYTNPDNEYAEKYHIEDGGQNWPDIKSKTLPAGGHKPLDHFYPTFGVIIWTRVA
Physico‐chemical
properties
protein length:635 AA
molecular weight: 70968,83030 Da
isoelectric point:4,97508
aromaticity:0,11024
hydropathy:-0,39307

Domains

Domains [InterPro]
IPR005604
ATT
1–113
IPR005604 IPR053827
DC_1930
STR
1–598
DC_1930
XYS97995.1
1 635
Architecture
ATT
STR
ATT
ATT 1-113 | STR 114-500 | ATT 501-634 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage phiY2
[NCBI] 		3440546 Viruses >
Host Shewanella sp.
[NCBI] 		50422 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS97995.1 [NCBI]
Genbank nucleotide accession
PV800133.1 [NCBI]
CDS location
range 34994 -> 36901
strand +
CDS
ATGAGAGAGACTAACTTATCCTTCGTGCAGTATACAGGTGATGGCACTACTCGTGCCTTTGCCTTCACTGTACAAGGTGAAGACATCGGTTACTTCAGAACAACCGATATTCACGGGTATGTTGACGGAGAGGAAGTTCCAATCCTGATTCACCCAAGCACTCCACACATGATGCAATTCTACACCGCCCCAGCTCGTGGAACATCTATCCTGATTAGACGGGAGATGCCTTTCAATAGAACGTATGCAGACTTTGAGCGTGGTAACAACTTCGGCAAGCGTCAGGTTAACAACTCCTTCTTGCAGCAGCTGTACCTAACTCAGCAGCTTATGGACGGGTTCCTGCCTGAAGGGTTCTACCTGAAGGACGACCTAGATATGGGTGGTCATCGTATTATCAACTTGGGTAAGCCAAGAGATAACTCAGACGCTGTTCGACTCATCGACCTTAAGGGCGGTATCAAGACTCCAAAGGGTGTAGCATTCTTAGGTGGCATGACTTACATTCGCTTAGCCACTGCATTGGTGTCTCCAGATACCGAAGCAGAGACAACAGTGATGACATACAATGCCAACTTTATGCCTTCAGCTGGTCGGAGAGCTATGCTGATGTCCGAGGCTGGTGATGTTGTGTTCCTGTCCGCTGACCTCAAGGAGCTTACCTTGAGAGACAAGGATGGCAATGCTGCTGACTTCGACATCTCTATGGTTGACTTACCACTGGAGGCTCAGGTCACCTTCAAGGTCATCTTCAAGCGTGAGAATGGCAAGCTGTACGTCAGTATCCTTCACGGAACTAACCAGTCTGGCTACTTCACTGTAGGCTCCTTTGCTGGGGGATTCACTAAGATGTTCGGTGGTGAGGATGAGGATTCACCTTCTCGTATCATCATATACAACCAGAACTACTTCTATAAGGGAATCACCAATGCTTGGGACTACTACAACCAGACGGGCATTAACGTGCAGGCTACCTATGTTGAGTTCACAGGTACGATTATTGGTCAGGACTGGGAAGCTGTAGACGAAGACGAGGGATTGATTGACCTCACTGTCACAGCGCCGAAGGTAAAATTCGACCCATACGGAACGGGTTTTAGCCAGCAGTCAACTGATGTAGATAAGGTACTTCGTGAAGCAGACCAGACCTTCATCCGTACCGACTTCATCGTAGAGCAGCCAGACTTCCCCGATGGCACTGTGCTATCACCTTACAGAACTTGGTTGGCTAATACACAGGATGCACCACGATTCAGACCACTACCAGCAGACCCTGCAAATGGTGTAGAGATTCGTGTCCGTGATAACTCAGGCCATGCAACTACCAACAACATTAGTATTGGTGGTAATGGTAAGACCATCATGGGGCTTGACGAAGACCTTAACATGACCGTTAGCTGGTCTTGGTGTACTTTGAAATACTTCAAAGACATTGATGACTGGCGAGTGGTAGAGGGTGGCGTAGGTGTTCAAGTACGTGCTGCCCCTTCTGAGGAGATGCAGCGTATGTATCCCGTAGGTCAGGTTCTCCTGACTATGAACCCTGCTAACCCAGCTGACTACCTAGGCTTCGGTGCATGGTCACGTGCAGCTCGTGGTCTAGTCTTGGTAGGTGCAGGTACTGGTAAAGACATCGAAGGTAACGAGAAACAATTCGCTATCGGTGCCAACGCTGGTAAGTACCAACACATGATTGAGATGGAACAGATGCCTGAGCACGTTCACGAAATCAACAACCACATCCGTTATACCAACCCTGATAACGAATACGCTGAGAAGTATCACATTGAGGACGGAGGACAGAACTGGCCAGACATCAAGAGCAAGACTCTACCTGCTGGTGGGCACAAGCCACTAGACCACTTCTATCCAACCTTCGGTGTGATTATCTGGACTCGCGTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc7803584ca3d72efad1b74ecb950b29614c97c16ab3c7c35dec2bb46e54e834
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6018
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50