Protein

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Genbank accession
AZV00152.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGIFFNRSGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTASGKFYAGEHSRSPWDIVGEVIADDVRQVYWQDLTDDQKATAAAKYHNGEGTPDDYFTYTPDQFIVVNGDVYDLDADAAVYEVEGLKGHVRILESTKADGGALAVQCVEGWEVISVYRVQVTS
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20306,46190 Da
isoelectric point:4,94587
aromaticity:0,12088
hydropathy:-0,27418

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Season12
[NCBI] 		2500556 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus FSLSP030 >
Host Salmonella enterica subsp. enterica serovar Newport
[NCBI] 		108619 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV00152.1 [NCBI]
Genbank nucleotide accession
MK286578.1 [NCBI]
CDS location
range 55465 -> 56013
strand +
CDS
ATGAAACTGAATATTACCGCGCCGGGCATTTTCTTTAATCGTAGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAGAGAATAGCGCCGGGGCCGTCGTGTCATTCCCGGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAGTTTAAGATCTGGACGGCATCGGGCAAGTTTTACGCGGGCGAACATTCCCGATCGCCGTGGGATATTGTCGGCGAAGTTATCGCGGACGATGTGCGCCAGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGACGGCGGCGGCCAAATATCACAACGGCGAAGGCACGCCGGACGATTATTTCACCTATACGCCGGATCAATTCATTGTGGTTAATGGTGATGTGTACGATCTGGACGCCGACGCGGCCGTTTATGAGGTCGAAGGCTTAAAAGGTCATGTGCGCATACTGGAAAGCACGAAGGCGGACGGGGGCGCGTTGGCGGTGCAATGCGTCGAAGGTTGGGAAGTCATAAGCGTTTACCGCGTACAGGTTACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1778f60739bcbbd17b625accb2342b62d680028c78edeb466cbcb9e0198c43d0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Salmonella siphophage Season12 Xie,Y., O'Leary,C.J., Liu,M. and Gill,J.J. 2020-02-06 — GenBank