Protein

View in Explore
Genbank accession
XBA92493.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQIKEITSPRYTESGAIDCDVLFEGMEDPLPYTATPEDTATTGQHIWEELQSGKWGEIAPFSVTPEMLESAKAAKRQEIEAWRAQQESQHFTIEWNGRTWNAGPDSLARLYPVVMTAKSDTARDVMTWGDADNQQVKLSMPELEELATAMAQAQVDRNDEIYQRQREMKQELNNLEDLNSVRNFIVE
Physico‐chemical
properties
protein length:187 AA
molecular weight: 21355,46730 Da
isoelectric point:4,45120
aromaticity:0,07487
hydropathy:-0,72460

Domains

Domains [InterPro]
DC_2197
STR
1–186
DC_2197
IPR025484
STR
71–174
IPR025484
Coil
Unmapped
158–178
Coil
XBA92493.1
1 187
Architecture
STR
STR 1-186 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Actinobacillus phage vB_Apl-pPE4
[NCBI] 		3153893 Viruses >
Host Actinobacillus pleuropneumoniae
[NCBI] 		715 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBA92493.1 [NCBI]
Genbank nucleotide accession
PP818812.1 [NCBI]
CDS location
range 45403 -> 45966
strand +
CDS
ATGCAGATAAAAGAGATTACCAGTCCCCGTTATACCGAATCCGGTGCGATTGACTGCGACGTGCTGTTTGAGGGAATGGAAGACCCACTTCCGTACACAGCCACGCCAGAAGACACGGCAACAACAGGTCAGCACATCTGGGAAGAGCTGCAAAGCGGCAAATGGGGCGAAATTGCCCCGTTCAGCGTCACGCCGGAAATGTTGGAGTCAGCAAAAGCAGCAAAGCGTCAGGAAATTGAAGCATGGCGCGCGCAGCAGGAATCGCAACACTTCACCATTGAATGGAACGGTCGCACCTGGAACGCTGGCCCCGACTCACTGGCCCGTCTCTATCCGGTAGTAATGACTGCGAAATCCGACACAGCACGGGACGTGATGACGTGGGGTGACGCCGATAATCAACAGGTGAAACTGTCGATGCCGGAACTGGAAGAACTGGCGACAGCAATGGCACAGGCACAAGTCGATCGCAATGACGAGATTTATCAGCGTCAGCGGGAGATGAAGCAAGAGCTGAATAACTTGGAGGATTTGAATTCGGTTAGGAATTTTATCGTGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff14a3180b185d27c52d39b93026c8940e2175c966f272d37a284ed048836dc2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9520
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Actinobacillus phage vB_Apl-pPE42 Assavacheep,P. and Tongmalee,S. 2013-02 — GenBank