Protein

View in Explore
Genbank accession
BEU75506.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFNYTPLTETQKLKDMYPKVNDIGNFLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYYKIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGNLYNEGNTLNVKELTESTTQYATLVNPPKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPETSYSNIKTDNWDTPPFWGYSSNSGRSGVRFRGENTVQIDDGSNTYPLVVSNRFKMGKELSVGDTVTVSVYAKINDPALLKDNLVYFELAGYDTVDDTSKNPYTGGRREITASEITTEWKKYSFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHATDVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGYHTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQGWKLLKQSETSTLLWEGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNTSNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRTSVQPGMVKSITLDGSTNTTKVASWNEKERIKVYNIMGINRG
Physico‐chemical
properties
protein length:640 AA
molecular weight: 72530,15460 Da
isoelectric point:6,52701
aromaticity:0,12813
hydropathy:-0,58359

Domains

Domains [InterPro]
DC_0568
STR
5–415
DC_0568
cd19958
STR
44–111
cd19958 G3DSA:2.60.120.260 DC_0448
IPR003305
CBM
237–337
IPR003305
BEU75506.1
1 640
Architecture
STR
STR 5-639 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BEU75506.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 293 293 0,6042
Central domain 294 505 213 0,2268
C-terminal 506 640 134 0,9669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-293
Central
294-505
C-terminal
506-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSNIID
[NCBI] 		3092519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BEU75506.1 [NCBI]
Genbank nucleotide accession
LC788704 [NCBI]
CDS location
range 60845 -> 62767
strand -
CDS
ATGGCATTTAACTACACGCCTCTTACTGAAACACAGAAGTTAAAAGATATGTATCCTAAAGTTAATGATATAGGTAACTTTTTAAAAACAGAAGTTAACCTTAGTGATGTAAAACAAATATCACAACCTGACTTTAATAATATTTTAGCATCTATACCTGATAGTGGTAACTATTATGTAACTAATTCAAAAGGTGCTCCTAGTGGAGAAGCTACGGCAGGATTTGTAAGATTGGATAAACGAAATGTAAATTATTATAAAATTTACTATTCACCATATAGCAGTAATAAAATGTATATCAAGACTTATGCTAATGGTACTGTATATGATTGGATTAGTTTTAAATTAGATGAAGGTAACTTATACAATGAAGGTAATACTTTGAATGTAAAGGAACTTACTGAATCCACAACTCAATATGCAACACTAGTTAATCCTCCAAAAGAGAACTTAAATACAGGTTGGGTTAATTACAAAGAAAGTAAAAATGGTGTTTCTTCTTTAGTAGAATTTAACCCGGTTAACTCCACTTCAACTTTTAAGATGATAAGAAAGTTACCAGTACAAGAACAAAAGCCTAACTTATTGAAAGATAGTTTATTTGTTTATCCTGAAACTAGCTATTCTAATATTAAAACAGATAACTGGGATACGCCTCCATTTTGGGGATATTCTTCTAATAGTGGTCGTTCAGGAGTTAGATTTAGAGGAGAGAATACAGTACAGATAGATGATGGGTCTAATACGTACCCTTTAGTAGTTTCTAATAGGTTTAAAATGGGTAAAGAGCTTTCTGTAGGTGATACTGTAACGGTATCAGTATATGCTAAAATTAATGACCCTGCTTTACTTAAAGATAACTTAGTTTACTTTGAATTAGCAGGATACGATACTGTAGATGATACTAGTAAAAATCCTTATACAGGAGGACGTAGAGAAATAACAGCAAGTGAGATAACAACTGAGTGGAAAAAATACTCTTTCACATTCACGATACCTGAAAATACAATCGGAGCATCAGGCGTTAAAGTTAATTACGTATCTTTACTACTAAGAATGAATTGTTCATCTAGTAAAGGTAATGGTGCTGTAGTATACTATGCCTTACCTAAATTAGAAAAATCATCTAAAGTTACACCATTTATCACACATGCAACTGATGTTCGTAAGTATGATGAGATTTGGTCTAATTGGCAAGAAGTTATTAGTAAAGATGAATTAAAAGGTCACTCTCCTGTAGATATTGAATATAATGATTATTTTAAATATCAGTGGTGGAAATCTGAAGTTAATGAAAAGAGTTTAAAAGATTTAGCTATGACAGTACCTCAAGGATATCATACATTTTATTGTCAAGGCTCTATTGCCGGGACGCCTAAGGGACGTTCTATTAGAGGAACCATTCAGGTAGATTATGACAAAGGTGACCCATATAGAGCTAATAAGTTTGTTAAATTATTGTTTACTGACACAGAGGGTATTCCTTACACATTATATTATGGTGGTTATAATCAGGGTTGGAAACTCTTAAAGCAATCAGAAACTTCTACTTTACTATGGGAAGGTACTTTAGATTTTGGGTCTACGGAAGCTGTTAACTTAAATGACTCATTAGATAATTATGATTTAATTGAGGTAACTTATTGGACTCGTTCAGCAGGACATTTTTCTACAAAAAGATTAGATATAAAAAATACATCAAATTTACTGTATATTAGAGATTTTAATATTTCAAATGATAGTACAGGTTCTAGTGTAGACTTTTTTGAAGGGTATTGCACTTTTCCTACTAGAACATCAGTACAACCTGGTATGGTAAAATCTATAACTTTAGACGGGTCTACAAATACAACAAAAGTAGCATCATGGAATGAAAAGGAACGTATAAAGGTATACAATATTATGGGAATTAATAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
849953378c6552269b9ee52315b0948c4e3983025ae0a5c61e5e4e7959878582
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Staphylococcus phage Azam,A.H. and Kiga,K. 2019-04-17 — GenBank