Protein

View in Explore
Genbank accession
AUG85465.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MSSSQLAEEFKALLIALNTIMLGDETQDMEYNGVIKPTWSKWLYQNRVMITNKADQAYVDSLAAAWSGGYFKSYPDLTTANADIANIPLNVSVKVLSEQDGGEWYKSTAGATQLSKSPFDPLRLAKIYADTVAAASMRYSETLFNVVSDGVIGLAKGEHSTIIPILTDGEGKALAYYDTEDETFKAGGLLESIFNRLIGFKLHEDPRYLALLTDESGKILIGWDKLKDEMIGGSGGGSSFASGSNYVPYKYNTRAVEAQKNHVLSYGQSLSVGAQGIPVITTSQPYSNETFGFVMNGITYSSPRMDVAATLVRPLFEVQYSPSSDGYNNNSRGETHCSGMANYSSYHMAVNYGRDPSSHVIFASTAGHGGYRIDQLKKGSAWYSVLMNHVTKGKELNVGFTYAVQAIPWQQGENNAFSSGVQTPYAEYKPELIQLQSDAENDIKAITGQTGIIPFITYQMSYAARTWPDIAKVQLDLVRENDRFMLSTPMYHLPYANDNIHLNAIGYKWLGAYIARAYNQYMFEGRKSDFINPKHAYIDGNRLRVKFDVPAMPLVLDEDTLAKTVDYGFVVKDGSNKMTIVSIMADGDEVIIDLNTTPTGAVTVRYAMDNLAAGVSITGGASGNLRDSTTDTTVIANNVYPLYHVCPHFELPVTVLKGI
Physico‐chemical
properties
protein length:659 AA
molecular weight: 72350,64040 Da
isoelectric point:5,32925
aromaticity:0,10622
hydropathy:-0,21396

Domains

Domains [InterPro]
DC_0547
STR
25–655
DC_0547
IPR036514
STR
267–522
IPR036514
SSF52266
STR
338–520
SSF52266
IPR005181
ENZ
364–519
IPR005181
AUG85465.1
1 659
Architecture
STR
STR 25-655 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUG85465.1
1 659
Domain Start End Length (AA) Confidence
N-terminal 1 521 521 0,5768
Central domain 522 648 128 0,5620
C-terminal 649 659 10 0,3844
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-521
Central
522-648
C-terminal
649-659

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15497
[NCBI] 		2060946 No lineage information
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUG85465.1 [NCBI]
Genbank nucleotide accession
MG674163.1 [NCBI]
CDS location
range 14096 -> 16075
strand +
CDS
ATGAGCAGTTCACAACTAGCCGAAGAATTTAAGGCCCTGTTGATTGCCCTCAACACGATCATGTTGGGGGACGAAACGCAGGATATGGAATATAATGGCGTGATCAAGCCCACTTGGTCCAAATGGCTGTATCAGAACCGCGTCATGATTACCAACAAAGCTGACCAAGCATACGTGGACAGCTTGGCCGCAGCTTGGTCAGGCGGTTATTTCAAATCATATCCAGACTTGACTACAGCCAATGCTGATATTGCCAACATTCCGCTAAATGTATCCGTCAAGGTTTTATCTGAGCAAGACGGCGGTGAGTGGTATAAATCCACAGCAGGTGCTACTCAACTTAGCAAGTCGCCTTTTGACCCTTTACGATTGGCCAAAATTTACGCGGATACCGTAGCGGCAGCATCGATGCGTTACTCAGAAACCCTTTTCAATGTGGTAAGTGATGGTGTTATTGGTTTGGCTAAGGGCGAACATAGTACAATCATCCCTATATTGACGGACGGTGAAGGTAAAGCCCTAGCATATTATGACACCGAAGACGAGACATTCAAAGCGGGCGGCCTTCTAGAGTCTATCTTCAATCGCCTAATCGGGTTTAAACTACATGAAGATCCGCGTTACTTAGCTTTGCTCACAGACGAGAGCGGTAAAATTTTGATCGGATGGGACAAGCTCAAAGATGAAATGATTGGTGGTTCGGGTGGCGGGTCGTCTTTTGCCAGCGGCTCAAATTATGTACCATATAAGTATAACACCCGTGCCGTGGAGGCGCAGAAAAACCACGTACTGAGTTACGGCCAGTCTTTATCGGTAGGTGCCCAAGGAATCCCAGTGATAACTACGTCGCAACCTTATTCGAATGAGACGTTCGGGTTTGTAATGAATGGCATCACATACTCATCTCCCCGTATGGACGTTGCTGCCACTTTGGTTAGACCTTTATTCGAGGTTCAATATTCACCGTCATCGGATGGATATAATAATAACAGCCGCGGTGAAACCCATTGTTCAGGCATGGCCAATTACTCGTCTTATCATATGGCGGTGAATTACGGCCGTGACCCAAGTAGCCATGTGATTTTCGCATCGACGGCGGGCCACGGCGGCTACCGTATTGACCAACTCAAAAAGGGGTCGGCATGGTACAGTGTCCTGATGAACCACGTCACCAAGGGCAAGGAACTGAATGTCGGGTTCACATATGCAGTTCAAGCGATCCCTTGGCAGCAAGGCGAAAACAACGCCTTTAGCAGCGGGGTTCAGACCCCGTACGCTGAGTATAAACCTGAGTTAATCCAGCTTCAATCAGATGCTGAGAACGACATCAAGGCGATCACTGGCCAAACTGGTATCATACCATTCATCACATACCAAATGTCATATGCGGCACGTACTTGGCCAGACATTGCGAAAGTTCAACTGGATTTAGTGCGTGAAAACGATCGCTTTATGCTGTCGACCCCCATGTATCATTTACCATACGCAAATGATAATATCCACCTGAACGCGATAGGCTATAAATGGCTAGGGGCATACATTGCTAGGGCATATAATCAATATATGTTTGAGGGACGTAAATCAGATTTCATAAACCCTAAGCACGCATACATCGACGGCAACCGCCTACGGGTGAAATTCGATGTTCCTGCTATGCCTCTAGTATTAGATGAAGATACACTGGCCAAGACTGTGGATTATGGCTTCGTGGTGAAGGACGGCAGCAACAAAATGACCATCGTGTCGATCATGGCTGACGGGGATGAGGTAATAATTGACCTGAACACCACACCTACTGGGGCAGTCACAGTTCGGTACGCTATGGATAACTTGGCGGCGGGGGTGTCAATCACTGGCGGTGCTAGCGGGAACCTTCGCGACTCAACCACAGACACGACAGTGATAGCAAATAATGTATATCCATTATACCATGTTTGCCCTCATTTTGAATTACCAGTTACAGTGTTAAAAGGAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98b5e608612b5c5164b659d3c688fc08aeea66269103337b8532b84c625d99f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7897
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Characterization of a Novel Bacteriophage SH-Ab 15497 against multidrug resistant Acinetobater baummanii Hua,Y., Xu,M., Wang,R., Hu,F. and He,P. 2019-09-01 — GenBank