Protein

View in Explore
Genbank accession
YP_007004200.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDLLYKTYKVYTEYNKPQATDNDFVSKANGGNYKNNVYFEKGLTFNDTNGYGIKLGARTGGAPFTASFRIKGAFGYETEDATPFIIFNPSTVVGAKRLTVMGDSLFRQVYDESGRVFSPGNTPTKAQVGLSLVDNAKQVQINNTNMQTMTGVLAAPNFISLNPASDAGHVPRFDQIVIKDSIQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23411,93420 Da
isoelectric point:7,82919
aromaticity:0,12093
hydropathy:-0,32419

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007004200.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,9599
Central domain 32 204 174 0,1613
C-terminal 205 215 10 0,6461
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Bp7
[NCBI] 		1052121 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007004200.1 [NCBI]
Genbank nucleotide accession
NC_019500 [NCBI]
CDS location
range 81248 -> 81895
strand -
CDS
ATGGCAGATTTAAAATTAGGTTCTACAGCAGGAGGTTCAGTATTATGGCACCAAGGTAATTTCCCCTTAACGCCTGTATCAAATGACCTTCTTTACAAAACATATAAAGTTTACACAGAATATAATAAACCACAAGCCACTGATAACGACTTTGTTTCAAAAGCAAATGGTGGTAATTATAAGAATAACGTGTATTTTGAAAAAGGGCTGACCTTTAATGATACTAATGGATACGGTATTAAATTAGGAGCAAGAACTGGCGGAGCACCGTTCACGGCTTCTTTCCGTATTAAAGGCGCTTTTGGATATGAAACGGAAGACGCTACTCCGTTCATAATATTCAACCCAAGTACAGTAGTAGGTGCTAAACGCCTTACAGTAATGGGTGATTCATTATTCCGTCAAGTTTATGACGAATCAGGTCGTGTATTCAGCCCAGGCAACACCCCTACTAAAGCTCAAGTAGGATTATCGTTAGTAGATAACGCAAAACAGGTCCAAATAAATAATACTAACATGCAAACAATGACCGGAGTACTTGCTGCTCCTAACTTTATTTCGCTGAATCCGGCCTCTGACGCAGGACACGTTCCTCGTTTTGACCAGATTGTTATTAAAGATTCTATTCAAGATTTTGGTTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
43dd7ce5374cfd10a9ac6876fcbbb4acf1cb06f5cd2e63ea012f29922e2af26e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4331
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Morphological observation on lytic cycle of bacteriophag Bp7 Liu,X., Ren,H., Liu,W., Wen,J., Zou,L. and Liu,C. 2010 — GenBank
Complete genome sequence and analysis of polyvalent Phage Bp7 of E. coli Wu,D. and Ren,H. 2013-06-12 — GenBank