Protein

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Genbank accession
WMM95133.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,86
Protein sequence
MSNARDKANIPVLNFQSKGIDDNATSTAITINSSQNVGIGTNSPVNDSNYTGLTLSGSTGSQVVLQDDGTTEALIWNNNAFNIEAKSTNPIKFLTNNSERMRIANNGNIGIGTTNTSPRLYVVSNSNENGMILDCVGTPSNYHFDVRNDNSSIFRIDSSGNVGIGTSSPGSMRLLVEGGNVYIKDHLIIGTGDSSTISSDSSGNPLLFGINLVEKMRINTNGNVGIGTTSPTQKLDVNGTVKATAFQGDGSALTGVGGANTPAFEAYLSTNQSFSNTTYQKVEFDTEIYDTDSDYDNSTNYRFTPTTAGKYLVYSTIVMYSTGGATISDGQLAIYKNGSLYKETDFEIDPEARINFSTSTVIDFNGSSDYVEIYGYLNVSSGTPTFRGSGTKQCHFGAFKIIT
Physico‐chemical
properties
protein length:403 AA
molecular weight: 42972,52110 Da
isoelectric point:4,64900
aromaticity:0,08685
hydropathy:-0,35161

Domains

Domains [InterPro]
DC_1386
STR
1–185
DC_1386 DC_1950
IPR008983
RBD
256–403
IPR008983
IPR008983
RBD
260–398
IPR008983
WMM95133.1
1 403
Architecture
STR
RBD
STR 1-185 | RBD 252-403
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95133.1
1 403
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,0422
Central domain 131 329 200 0,2042
C-terminal 330 403 73 0,9903
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-329
C-terminal
330-403

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC131P
[NCBI] 		3072835 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95133.1 [NCBI]
Genbank nucleotide accession
OR420738 [NCBI]
CDS location
range 34547 -> 35758
strand +
CDS
ATGAGTAACGCAAGAGATAAAGCTAACATACCAGTATTAAATTTTCAATCTAAAGGTATAGATGATAATGCTACAAGCACAGCTATTACTATTAATAGTAGTCAGAATGTTGGTATTGGTACAAACAGTCCAGTAAATGACTCTAATTATACTGGTTTAACTTTATCAGGTAGTACTGGCTCACAAGTTGTACTGCAAGACGACGGCACAACCGAAGCTTTAATTTGGAATAACAACGCTTTTAATATTGAGGCTAAAAGCACTAATCCTATTAAGTTTCTCACCAACAACTCAGAACGTATGCGTATTGCTAATAATGGTAACATAGGAATTGGTACAACTAACACAAGTCCAAGACTTTACGTTGTCTCTAACAGTAATGAAAATGGAATGATTCTTGATTGTGTTGGAACTCCTTCAAATTACCATTTTGATGTTAGAAATGATAATAGTTCAATATTTAGAATAGACAGTTCTGGTAACGTAGGTATTGGTACAAGTTCTCCAGGTAGTATGAGATTATTAGTTGAAGGTGGAAATGTTTATATCAAAGACCATTTAATAATTGGAACTGGAGATAGTTCAACAATTAGTTCTGATTCTTCAGGCAATCCACTTTTATTTGGAATTAACCTAGTTGAAAAAATGCGTATCAACACTAATGGTAACGTAGGTATTGGTACAACTTCTCCAACACAAAAACTAGATGTTAATGGAACAGTAAAAGCTACAGCATTTCAAGGAGATGGTTCTGCATTAACTGGTGTTGGTGGTGCTAACACTCCTGCTTTTGAAGCTTATCTTTCTACTAATCAAAGTTTTTCTAACACTACTTATCAAAAAGTAGAATTTGACACAGAGATTTATGACACAGATAGTGATTATGATAATTCAACCAATTACAGATTTACTCCAACTACTGCTGGAAAATATTTAGTATATTCTACTATAGTAATGTATTCAACTGGTGGTGCTACAATTTCAGATGGTCAATTAGCAATTTATAAAAATGGTTCTTTATATAAAGAAACTGACTTTGAAATTGACCCAGAAGCAAGAATAAATTTTAGTACATCTACTGTTATAGACTTTAATGGTTCATCTGATTACGTTGAAATTTATGGTTATCTAAATGTATCTTCTGGAACACCTACTTTTAGAGGTTCTGGAACAAAACAATGTCATTTCGGAGCATTTAAAATTATAACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ed189a923deb83b048d7e2c972ccc09a29e24a7cf598867f11b1b223b2a77779
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7841
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50