Protein

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Genbank accession
YP_008059153.1 [GenBank]
Protein name
sialidase
RBP type
TSP
Evidence RBPdetect2
Probability 0,79
Protein sequence
MVYETSGSTDRVTPDQLVSEVLETSLGSGVMSFVETGLTFDPDYGSEELTVTSGVAYILSDGQGLKLTPGETTVPLESGTVNYIYLVKPFTGFEVGYVVKTQDVAPAQSSLKVGTVDTGSNATQELNRGAALSPDKFGNDIDADGNDITNVGTFSSGSTNTTRGIITDDTYHPELIPVSDQTGRNYGSVAYPVDDTEWVCVYRSGTEHGDDNGALLQRRTTDGGVSWIDEGAAVDNSSIDDRNPAGGVLPSGDWILFYMRYDHDTSDFLDMGYRLSSDNGESWSSYTTIDTRGYPTYSPYGKTIETDSGTLLQPIYGEDNSGGAVWVIESTDGGQTWSDKATVEQASTNYPNEAWITRLFDGTLLCISRVTGNQLPQQYYSTDDGNTWTSDGEIPISDIHQGSPTVAPVVWYNDEKKIVEMLVSTRGTKWRAGGSEVSKLIYGYAKAGDVVGDTSAWVGSDSILTTENTAKKMESYCYPFEVDGDYYSTVSLSSNGDSVLHMGRADTFRRGFGSRMPLVQGNRVDQVRAGLIQQVNIDKVVNKSVSNDTAGSYETVDFSKDIPKNSAAVIVSIGVKPDGTPDATSTVEVRPDDYTDANTGRVDIASDLSSGFIFNQVSTTHSNGRIAVRTSNTSNSIIRLRGYKP
Physico‐chemical
properties
protein length:645 AA
molecular weight: 69563,09020 Da
isoelectric point:4,35400
aromaticity:0,08837
hydropathy:-0,43860

Domains

Domains [InterPro]
G3DSA:2.120.10.10
STR
184–468
G3DSA:2.120.10.10
G3DSA:2.120.10.10
STR
185–468
G3DSA:2.120.10.10
IPR036278
STR
188–395
IPR036278
PTHR43752
Unmapped
192–389
PTHR43752
IPR011040
ENZ
199–401
IPR011040
cd15482
ENZ
207–389
cd15482
YP_008059153.1
1 645
Architecture
STR
STR 184-468 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008059153.1
1 645
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9371
Central domain 164 362 200 0,2682
C-terminal 363 645 282 0,7445
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-362
C-terminal
363-645

Taxonomy

  Name Taxonomy ID Lineage
Phage Halovirus HCTV-5
[NCBI] 		1273748 No lineage information
Host Haloarcula californiae
[NCBI] 		244363 Archaea > Euryarchaeota > Halobacteria > Halobacteriales > Halobacteriaceae > Haloarcula

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008059153.1 [NCBI]
Genbank nucleotide accession
NC_021327 [NCBI]
CDS location
range 67992 -> 69929
strand +
CDS
ATGGTGTATGAAACGTCTGGTTCGACTGACCGCGTCACACCTGACCAACTGGTTAGCGAGGTGTTAGAGACTTCGTTAGGTTCCGGGGTGATGAGTTTCGTTGAAACAGGGCTTACGTTTGACCCGGATTATGGGAGTGAGGAACTAACTGTGACATCCGGGGTAGCGTACATCCTCAGTGATGGCCAAGGATTGAAACTGACTCCTGGTGAGACTACAGTCCCACTCGAAAGCGGTACTGTTAACTATATTTATCTTGTCAAGCCTTTTACTGGGTTTGAGGTTGGGTATGTAGTGAAGACACAAGACGTTGCTCCTGCGCAGTCTTCACTAAAAGTCGGAACAGTTGATACCGGGTCAAATGCAACTCAGGAGTTAAATCGAGGAGCTGCACTCTCCCCTGATAAATTCGGTAATGATATAGATGCTGATGGAAACGACATTACAAATGTCGGAACGTTCTCTTCAGGGTCTACAAATACAACTCGTGGCATCATCACTGACGACACCTACCACCCCGAACTGATACCAGTCTCTGACCAAACAGGCCGTAATTACGGCTCTGTCGCGTATCCTGTAGATGACACTGAGTGGGTGTGCGTTTACCGCTCGGGCACCGAACACGGGGACGATAACGGTGCCCTACTCCAGCGACGTACGACAGACGGCGGCGTGAGTTGGATTGATGAAGGCGCAGCAGTTGACAACTCCAGCATCGACGACCGCAATCCAGCCGGTGGGGTTCTCCCATCTGGCGACTGGATACTATTCTACATGAGGTATGACCACGACACGAGTGACTTCCTCGATATGGGGTACAGGCTATCGTCTGACAACGGTGAGTCGTGGTCCAGTTATACCACTATCGACACTCGTGGCTACCCAACATATTCCCCATACGGCAAAACCATCGAGACAGATTCCGGTACTCTATTACAGCCCATTTACGGCGAAGACAACAGTGGGGGGGCCGTCTGGGTCATCGAATCCACTGATGGGGGTCAAACGTGGAGTGATAAGGCAACGGTCGAGCAAGCATCAACCAACTATCCAAACGAAGCCTGGATTACGAGACTGTTCGACGGCACCCTCTTATGCATCTCTCGCGTGACAGGTAATCAGCTACCGCAACAATATTACTCGACTGACGATGGGAACACGTGGACATCGGACGGAGAAATACCAATCAGCGATATACATCAGGGCAGTCCGACCGTCGCTCCAGTTGTCTGGTACAATGACGAGAAAAAAATTGTGGAGATGCTTGTATCAACGAGAGGGACGAAATGGAGAGCGGGTGGAAGTGAGGTTAGCAAACTCATCTATGGATATGCGAAAGCTGGGGACGTAGTGGGTGATACGTCTGCTTGGGTAGGGAGTGACTCTATACTCACAACCGAAAACACTGCGAAGAAAATGGAGTCGTATTGTTATCCGTTCGAAGTTGATGGAGACTACTACTCAACAGTATCACTGTCGTCAAACGGCGACTCCGTGTTGCATATGGGTCGGGCAGACACGTTTCGACGCGGGTTTGGCAGCCGGATGCCGCTCGTCCAGGGGAATCGTGTGGACCAAGTCAGAGCGGGCCTAATACAACAAGTTAATATCGACAAGGTTGTGAACAAAAGCGTCAGTAATGACACCGCGGGGTCGTACGAGACTGTCGACTTTTCGAAAGATATCCCGAAGAACTCGGCCGCCGTTATCGTCTCAATCGGCGTCAAACCAGACGGAACACCGGACGCGACCAGTACGGTCGAAGTAAGGCCCGATGACTACACCGACGCGAACACTGGGCGAGTGGATATCGCCTCAGACTTATCATCGGGATTTATATTTAACCAAGTGTCGACCACACATAGCAACGGTCGCATAGCAGTCCGGACCTCGAACACATCAAACTCAATTATTCGGCTCCGTGGGTACAAGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9ccd90c4d99f05e358924d43c1a21864bbf4818db47b81b6a82a1e28a25ebb41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7218
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50