Protein

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Genbank accession
YAW78891.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,63
Protein sequence
MLTPSSNLKGTYSFTEGKYSVGVLVGHQDNPNSIFDPTDTTKVTPASWGDSSAWPTTGKPGMFFYDSETNLMPYVAYNKANNRWQVAEKSGSALNVSNIVHETIYNGVPYTENVKFLLWNAGNADIPGDRYPAHEKFTAKRLAEDISQNIPLATTSKVGVVELASTINDNNNGITGPKVLQPRTARDYIDLHLRKSGGTVTGIVKFNDNVHLQLGSAADLSIYHNSSNNWNYITTSQNLQINASAVNLYHAGSRKLYTTTSGIQISGSQSIDGALSVVGNVSGGNLITGGNVDAQHGQVRGQTLVSDSTITAGSTITAASGLVTNSGNIVANNGSLIVSGNVNASGATFTADVNVRSINASANVIAQYGTVRGELLVADNYVSAGGRITSGSYITAASYITSSSGNITAASGSVIASANVYANGGRFLSDGSPVYLSHNGSNSGVVYIRPNGENSSANEFYIPTSGPANLRTSLITTHLNTGSITASSGVYSGSVTAYRHITTYDGTNYYPAIQIGATQTGFYLDNNTLWATIGGGPYVGMSSVGVTLPNGTTNTTANDGTIRYNGSTKSLEVRYDSKWNSTGKPESVWTGSATTVTNSWGNYNWFFITFKVNNISYSVMIYADPSSEQRAAVPSPDRYEDNWWITYSGGVFRTWRNSSARIVRITRI
Physico‐chemical
properties
protein length:668 AA
molecular weight: 70987,19950 Da
isoelectric point:7,78490
aromaticity:0,09431
hydropathy:-0,26826

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAW78891.1
1 668
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,4970
Central domain 271 469 200 0,6180
C-terminal 470 668 198 0,8012
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-469
C-terminal
470-668

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage SA-M
[NCBI] 		3417976 Viruses > unclassified bacterial viruses >
Host Shewanella algae
[NCBI] 		38313 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAW78891.1 [NCBI]
Genbank nucleotide accession
PQ510825.1 [NCBI]
CDS location
range 195623 -> 197629
strand +
CDS
ATGTTGACACCAAGTTCAAACCTTAAAGGTACATATAGTTTCACCGAGGGAAAATATTCTGTTGGGGTTTTAGTTGGTCATCAAGATAATCCTAACAGTATATTCGACCCAACGGACACAACTAAGGTAACTCCAGCTTCTTGGGGTGATTCTTCAGCGTGGCCTACAACGGGGAAACCAGGCATGTTCTTTTATGATTCTGAAACGAATCTTATGCCTTATGTCGCCTATAATAAAGCTAACAACAGGTGGCAAGTTGCTGAGAAATCAGGATCTGCATTGAATGTTAGTAATATTGTACACGAAACAATATACAATGGTGTACCTTACACTGAAAACGTGAAATTTCTATTATGGAACGCTGGTAATGCAGATATCCCAGGTGATAGATACCCAGCACATGAGAAATTCACAGCAAAACGATTAGCAGAAGACATATCACAAAACATACCATTAGCAACAACTTCAAAAGTTGGTGTTGTTGAGCTTGCTTCTACTATTAATGATAATAATAATGGTATTACTGGTCCTAAAGTTCTACAACCAAGAACAGCACGTGACTATATAGATCTTCACCTGAGAAAATCTGGTGGTACTGTAACTGGTATTGTCAAATTTAATGATAACGTACATTTACAACTTGGTTCTGCTGCTGATTTGTCAATATATCATAACAGTTCAAATAATTGGAACTATATAACTACCTCACAAAATCTACAAATAAATGCAAGTGCGGTAAACTTATACCATGCTGGTTCCCGTAAATTATATACAACAACTTCTGGTATTCAAATATCTGGTAGTCAATCTATAGATGGAGCATTATCTGTTGTTGGTAACGTTTCTGGTGGCAATCTTATTACTGGTGGTAATGTTGACGCCCAACACGGTCAAGTCCGTGGGCAAACATTGGTTTCAGATTCTACTATTACTGCTGGTTCTACTATTACTGCTGCTTCTGGGTTAGTTACAAATTCAGGAAACATAGTAGCAAATAATGGAAGTCTTATAGTATCTGGTAACGTTAATGCTTCGGGTGCTACCTTTACTGCTGATGTTAACGTTAGAAGTATAAATGCCTCTGCAAACGTTATTGCTCAATATGGTACTGTTCGTGGCGAACTATTAGTTGCGGATAACTATGTTTCAGCAGGTGGAAGAATAACATCTGGGTCATATATAACCGCAGCTAGTTATATAACATCAAGTAGTGGAAATATAACAGCAGCAAGTGGTTCAGTTATAGCATCAGCGAACGTTTATGCTAATGGTGGCAGATTCCTATCTGATGGTTCCCCTGTATACCTGTCTCATAACGGTAGCAACTCTGGTGTTGTTTATATAAGACCTAATGGTGAAAACTCTTCAGCAAATGAATTTTATATACCAACTTCTGGTCCAGCTAACTTAAGAACAAGTCTAATAACAACCCATCTCAATACGGGTTCTATCACGGCTTCTAGTGGAGTTTACAGTGGCTCAGTTACAGCATATAGACATATAACAACATATGATGGTACTAATTATTATCCAGCCATTCAAATAGGTGCCACACAAACAGGATTTTATTTGGATAATAATACATTATGGGCAACTATTGGTGGAGGTCCGTATGTTGGTATGTCTTCTGTTGGTGTTACACTACCAAATGGAACAACAAATACAACCGCAAACGATGGAACTATAAGATATAATGGTTCTACTAAATCATTAGAGGTTAGGTACGACAGTAAATGGAACTCCACTGGTAAACCAGAATCAGTATGGACAGGTAGCGCAACAACAGTAACCAACAGTTGGGGTAATTATAACTGGTTCTTCATAACATTCAAGGTAAACAATATATCATATAGTGTTATGATTTATGCAGATCCAAGTTCAGAGCAACGTGCCGCCGTACCTTCACCAGATAGATATGAGGACAACTGGTGGATCACGTATTCGGGTGGTGTATTCAGGACTTGGAGAAATAGTTCAGCACGTATTGTTAGGATAACCAGAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3caf932f32dc5a0d98941261d4144074fb7aa067e09dde9a63e31ab1524ecd92
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50