Protein

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Genbank accession
UHS65536.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARKFGVKQNEVVYFAVGVDLGGYKVIYDKSTQRAYSLPVLPVGTTAVSLNKHAVLVHSAGTVDLGELAATRREFVNLSDSFATGLVVNTRNELLFYNGIGYTYLGSLPVTIVAGTNPVGNADWKPQTDPNLRDVRAFGVVGDGSDEASSLQLAINSGNVFVPPGMTISHSQVNIPKGTIFTFGHGAGLTSLTANALNFVSESQFSLLSPAASGATSITLTSEVAGTGYTRALVIRTEDTSDAWYIANAQNPDVTGYQGESFLISSISGATVNLATALPWDLTTTNSVIYLIKGNATKFIGGILKNSASGSSYMYQSVGASLIEFHGTVFDYNGNGGSRHDNAYGVVYHNTTHTGRVGNGNIFFGYGSTDCTVTGTTHIGGTGGDAQIISYAGCRNIRTSHNTLKPTANNGGIYFGAKCFDCNTHADYIKGGKYGVMGAFGAQRIVVDSLAADDQVSGVIFMEQCQNFTITNPSIRFVKTGAQTTAAILIKDCDYVTVDANVPVNTGANGYIVSMYSAPAYTLTVRKNINITVKGTGSVYLTSPMTNFSIKDCLTSGNITVYYANGTSTYGRVTRNSCRFLVAQSFQYCDIDSNTIAGASDSEGIRLGGNCRWNNVYRNKVSGVTTAFFVNSAPANLYTNAFHDDNVIDYSTVTTFVSSQTGTATPATGALNPAPVRNFFLPATGWQDSPTVKRTVSGWRHKGTTTGTASDWFTIPSPEA
Physico‐chemical
properties
protein length:741 AA
molecular weight: 78467,62470 Da
isoelectric point:7,56535
aromaticity:0,09987
hydropathy:-0,06478

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_1953
STR
1–737
DC_1953
UHS65536.1
1 741
Architecture
ATT
STR
ATT 1-156 | STR 157-737 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UHS65536.1
1 741
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,9916
Central domain 169 677 510 0,9800
C-terminal 678 741 63 0,9417
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-677
C-terminal
678-741

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM-RPN242
[NCBI] 		2900331 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UHS65536.1 [NCBI]
Genbank nucleotide accession
OL656110.1 [NCBI]
CDS location
range 117996 -> 120221
strand -
CDS
ATGAACGAAATGTTCTCACAAGGCGGTAAAGGCTCTACTGGTATTCTTACCAATAAGCAAGCCATTGCTCGTAAGTTTGGTGTTAAGCAAAATGAAGTAGTCTACTTTGCTGTGGGAGTGGACTTGGGTGGCTACAAAGTAATCTATGACAAGTCTACCCAACGTGCTTACTCATTACCTGTACTTCCAGTAGGAACCACTGCCGTAAGCCTCAATAAACATGCAGTCCTGGTTCATTCCGCAGGCACAGTTGATTTGGGGGAACTGGCTGCTACACGTAGAGAGTTCGTGAACCTATCCGACTCGTTTGCTACTGGTTTAGTTGTGAATACTAGAAATGAATTACTATTTTATAATGGCATAGGTTACACCTACTTAGGTTCCTTACCTGTAACTATTGTCGCAGGAACTAACCCAGTTGGTAACGCTGACTGGAAGCCGCAGACAGATCCTAATTTACGGGACGTGCGTGCTTTTGGGGTTGTCGGTGATGGGTCTGATGAGGCATCTAGTTTACAGTTAGCCATTAACTCGGGGAATGTTTTTGTTCCTCCGGGCATGACAATTTCCCATTCACAAGTCAACATACCAAAAGGTACGATTTTTACTTTCGGTCACGGTGCTGGGTTGACATCATTGACCGCTAATGCTCTTAATTTCGTCAGCGAGAGCCAATTCAGCTTGCTTTCCCCTGCGGCTTCCGGAGCAACGTCCATCACATTAACATCTGAGGTGGCAGGAACTGGGTATACTCGGGCGTTGGTAATACGCACTGAGGACACAAGTGACGCTTGGTATATTGCCAACGCACAGAATCCGGATGTAACCGGATACCAAGGCGAATCTTTTTTAATCTCGTCCATATCAGGTGCTACCGTAAATTTAGCAACGGCTTTACCGTGGGACCTAACTACCACCAATTCGGTTATTTATCTTATAAAAGGCAACGCTACTAAGTTCATCGGGGGAATCTTAAAAAATTCTGCGTCAGGGTCTAGCTACATGTACCAATCTGTGGGGGCTTCGCTTATAGAGTTCCATGGTACTGTTTTTGATTATAATGGAAATGGCGGTTCAAGGCATGATAACGCGTACGGTGTGGTGTACCACAACACTACCCATACCGGGCGTGTCGGAAATGGTAATATATTTTTTGGTTACGGATCTACAGATTGTACTGTTACAGGTACGACCCACATTGGAGGGACCGGTGGGGATGCGCAAATAATATCTTATGCTGGCTGCCGTAACATCCGTACATCCCATAACACCCTAAAACCTACGGCCAACAACGGAGGTATATATTTTGGTGCAAAATGCTTCGACTGCAACACCCATGCTGATTATATTAAAGGCGGAAAGTATGGGGTTATGGGGGCATTTGGTGCTCAGCGTATTGTTGTAGACTCGCTGGCGGCAGACGATCAAGTATCAGGCGTTATCTTTATGGAGCAATGCCAGAACTTTACCATCACAAACCCGTCTATTAGATTCGTAAAGACTGGCGCTCAAACAACCGCTGCGATATTAATTAAGGACTGTGATTATGTGACAGTGGATGCAAATGTCCCTGTAAATACAGGGGCGAACGGGTATATAGTCAGTATGTATAGCGCGCCCGCATACACCCTGACAGTTAGAAAAAATATAAACATTACAGTGAAAGGTACTGGCAGTGTATACCTTACTAGCCCTATGACCAATTTCTCGATTAAAGACTGTTTAACATCTGGCAATATAACAGTTTACTATGCCAATGGTACGTCTACTTACGGCAGGGTTACGCGTAATAGTTGCCGGTTTTTAGTAGCTCAAAGTTTCCAATATTGTGACATAGATAGTAACACCATTGCGGGGGCTTCTGATTCTGAGGGTATACGCCTTGGTGGTAACTGTAGATGGAACAACGTATATAGAAACAAGGTTAGCGGGGTTACTACGGCATTCTTCGTTAACTCAGCACCCGCAAATCTATACACGAATGCGTTTCATGATGATAACGTAATAGATTACTCAACAGTAACCACCTTCGTATCATCTCAGACTGGAACCGCCACGCCAGCTACTGGAGCGTTAAACCCCGCCCCAGTGAGGAATTTCTTTCTCCCGGCAACAGGTTGGCAGGATAGCCCTACGGTAAAAAGAACTGTTAGTGGCTGGAGGCATAAAGGCACTACAACAGGAACAGCGTCCGATTGGTTTACTATCCCCTCGCCAGAAGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab4e8f4d4b9726e7d137915074c7e4c9340b0d94124b8458a1a4b094d9fb0353
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8000
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome analysis of a novel Escherichia phage, vB_EcoM-RPN242 Imklin,N., Sriprasong,P., Thanantong,N., Lekcharoensuk,P. and Nasanit,R. — — GenBank