Protein

View in Explore
Genbank accession
ATS93724.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAQYEDKVVEVLVTLPEPSASTSGGSGAPFTGIETQDTVSTTLIGDGTQSSPLQANINISRRSGNRLQVVSTSSEQGLYVAGSDTKVSAKDGNTVTYISAQDAANAGNPALEGVYSDPVNVSTTSPKETLEIKADPTGKAKTQIDVIVDPDSMNALKVGTAGLSVPVSVAQDNTLEIRQGALYVRPQETKISQDPNNKIQVKSDGIYVDTVKGDKGDTGATGPAGPQGPQGDPGPQGPQGQQGDKGDKGDTGDVGPAGATGPAGAQGARGPEGPKGPAGIGINVIDQLDEVSQLPAVAEMELGDTYVIGQSFWTVVNENNVKQWKDIGNFAGPEGLSAYEVAEGAGFVGTVDEWLESLKGADGIGLQILGSFPDPSYLPDEGNKPGDCYIIQDMMYVWAGDEDGWQTVGQIGPEGKSAYQVWLANGHTGSQVDFLNSLIGPQGPKGDKGDKGDTGADGTNANAINLLGKVADEASLPAGADAGDAYLIGTNVWVSTGNDNWENLGAFQGPKGDQGDVGPAGPKGDKGDAGDVGKDNYALAVENGFQGSLSDYLASLKGAKGDTGPTGPRGLTGPQGAKGEVGEGLAILGSKADPSELPSNPVTGDAWLIGEDLYIFNGTAWENAGPVRGPKGDTGATGPAGAKGDKGDQGEKGDKGDKGDKGDPGDTGATGAGVIPKGTVTSAATLPPTGNTVGDYYVTEDTGTGYSWNGTTWVDLGVVRGPQGPQGDKGDTGDQGPQGVKGDTGATGPQGPQGDIGPGVEIMGKLNSTSELPSTGQLGQGYLIDGDFWGWTGSAYENLGRIQGPVGPTGPTGDPGPTGPQGVKGDKGDQGSLWIVFDHDPGPADGRVGDYFLNSSTLQFFRKTNATTWAPMGYMGGGNVYDAPKDGKQYTRIDGDWTELDVLEAPQDNGYYVRKDGAWVKLDRYDLRVIETTGEMDAAAGNCFKVDGTANKTMSLTGLPAGRAMTIVIRFLGKGAQLTWPANLSWSNGTAPALGTARTVVTLFWDGEFLTGTQAMTVD
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 104425,04590 Da
isoelectric point:4,29608
aromaticity:0,06575
hydropathy:-0,50226

Domains

Domains [InterPro]
DC_1512
ATT
1–89
DC_1512 DC_0915 G3DSA:1.20.5.320 IPR008160 G3DSA:6.20.230.10 G3DSA:6.20.230.10
IPR050149
Unmapped
212–838
IPR050149
IPR008160
STR
219–274
IPR008160 DC_1593
ATS93724.1
1 1019
Architecture
ATT
ATT
STR
ATT
STR
ATT 1-89 | ATT 118-381 | STR 382-877 | ATT 878-924 | STR 925-1019
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_IV
[NCBI] 		2041491 No lineage information
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93724.1 [NCBI]
Genbank nucleotide accession
MF979563.1 [NCBI]
CDS location
range 7062 -> 10121
strand +
CDS
ATGGCACAATATGAAGATAAGGTCGTGGAAGTTCTGGTGACTCTCCCGGAACCGTCTGCGAGCACCTCTGGTGGTTCTGGTGCGCCTTTCACGGGCATCGAAACCCAAGACACCGTATCCACCACGCTGATTGGTGATGGTACTCAATCCTCCCCTCTGCAAGCAAACATCAACATCTCCCGTCGTTCAGGAAACCGCCTCCAAGTGGTGAGCACCTCCAGTGAGCAGGGTCTGTATGTTGCTGGCTCCGACACCAAGGTGTCTGCTAAGGATGGGAACACCGTAACTTACATCTCCGCCCAAGATGCTGCTAACGCTGGCAACCCGGCCCTGGAAGGTGTATACTCTGATCCGGTGAACGTGTCAACCACGTCACCGAAGGAGACTCTGGAAATCAAGGCTGATCCTACCGGGAAAGCCAAGACCCAAATCGACGTGATCGTTGATCCAGATTCCATGAACGCCCTGAAGGTAGGCACTGCTGGCCTGAGCGTTCCTGTTTCTGTGGCTCAAGACAACACGCTGGAAATCCGCCAGGGTGCTCTGTACGTTCGCCCGCAAGAGACTAAAATCTCCCAAGACCCAAACAACAAGATTCAAGTCAAGTCTGACGGGATTTACGTTGACACTGTAAAAGGTGATAAAGGGGATACCGGGGCAACTGGCCCGGCAGGCCCTCAAGGCCCACAGGGAGACCCGGGTCCTCAAGGTCCGCAAGGCCAGCAGGGCGATAAGGGCGATAAAGGTGACACCGGAGACGTAGGACCAGCGGGGGCAACTGGCCCGGCAGGGGCACAGGGTGCTCGTGGCCCAGAAGGTCCGAAAGGCCCGGCTGGTATTGGTATCAACGTCATCGATCAGCTTGACGAAGTTTCTCAGCTTCCGGCTGTTGCAGAAATGGAACTGGGTGACACTTACGTTATTGGACAGAGTTTCTGGACCGTTGTCAACGAAAACAACGTGAAGCAGTGGAAGGACATCGGTAACTTCGCGGGGCCTGAAGGTCTGTCTGCTTATGAAGTTGCAGAAGGAGCGGGCTTCGTTGGTACTGTTGATGAGTGGCTGGAATCCCTGAAAGGGGCTGACGGTATCGGTCTGCAAATTCTTGGTTCCTTCCCTGACCCGTCCTATCTGCCTGATGAAGGTAACAAGCCGGGTGACTGCTACATCATCCAAGACATGATGTATGTGTGGGCAGGTGATGAAGATGGATGGCAGACTGTAGGTCAGATTGGCCCAGAGGGTAAATCTGCGTACCAGGTATGGCTGGCTAACGGTCACACCGGATCTCAGGTTGACTTCCTGAACTCCCTGATTGGCCCACAAGGACCGAAAGGTGATAAAGGCGACAAAGGTGATACGGGTGCTGACGGTACTAACGCCAACGCCATCAACCTCTTGGGTAAAGTCGCAGACGAAGCGAGCCTCCCGGCGGGCGCGGATGCAGGCGATGCCTACCTGATCGGGACTAACGTTTGGGTATCCACTGGGAATGACAACTGGGAAAACCTCGGTGCCTTCCAAGGCCCTAAAGGTGATCAGGGGGATGTAGGCCCTGCTGGCCCAAAAGGCGACAAGGGAGACGCAGGTGACGTAGGCAAAGACAACTACGCATTGGCGGTAGAGAACGGGTTCCAAGGTTCCCTGAGCGACTACCTGGCATCTCTCAAAGGTGCGAAGGGCGACACAGGCCCGACTGGTCCACGTGGTCTTACTGGCCCGCAGGGTGCGAAAGGGGAAGTAGGGGAAGGTCTCGCGATCCTCGGATCAAAAGCTGATCCTTCAGAACTGCCTTCCAATCCGGTAACTGGTGACGCATGGCTGATCGGAGAAGACCTGTACATCTTCAACGGCACTGCTTGGGAGAATGCAGGCCCTGTCCGTGGTCCGAAAGGTGACACCGGAGCCACTGGCCCTGCTGGAGCTAAGGGTGACAAGGGTGACCAAGGCGAGAAAGGCGACAAGGGCGACAAAGGGGATAAAGGTGATCCGGGGGATACTGGTGCCACAGGCGCAGGTGTTATTCCGAAGGGAACTGTAACCTCTGCTGCGACCCTGCCTCCTACCGGGAACACCGTCGGTGATTACTACGTCACTGAGGACACTGGGACCGGATACTCTTGGAACGGGACAACCTGGGTTGACTTGGGAGTTGTGCGTGGACCGCAAGGACCGCAGGGCGACAAAGGTGATACCGGAGACCAAGGCCCACAAGGTGTGAAAGGTGACACTGGTGCTACAGGCCCTCAAGGCCCGCAAGGTGACATCGGCCCGGGCGTTGAGATCATGGGTAAACTCAACAGCACTTCAGAACTGCCTTCAACGGGGCAACTGGGTCAGGGTTACCTGATTGACGGCGACTTCTGGGGATGGACTGGCTCTGCCTACGAAAACCTCGGACGTATCCAAGGCCCGGTTGGTCCTACTGGTCCTACTGGTGACCCAGGCCCTACTGGTCCGCAGGGTGTCAAGGGTGATAAGGGTGATCAAGGTTCCTTGTGGATCGTGTTCGACCATGACCCGGGTCCTGCTGATGGTCGTGTAGGCGACTACTTCCTGAACTCCTCCACGTTGCAGTTCTTCCGCAAGACGAACGCAACCACTTGGGCACCGATGGGCTACATGGGTGGTGGTAACGTCTATGATGCACCGAAGGACGGCAAGCAGTACACCCGTATCGACGGAGACTGGACTGAACTCGATGTCTTGGAAGCGCCTCAAGACAACGGATACTACGTTCGTAAGGATGGTGCTTGGGTCAAACTGGATCGTTACGACCTGCGTGTCATCGAGACCACTGGTGAAATGGACGCCGCTGCCGGGAACTGCTTCAAAGTTGACGGTACTGCGAACAAAACCATGTCTCTGACTGGCCTGCCTGCCGGACGTGCGATGACCATCGTTATCCGCTTCCTCGGCAAAGGCGCTCAGTTGACATGGCCTGCGAACCTGTCATGGTCCAACGGCACTGCCCCGGCGCTCGGAACCGCTCGTACAGTGGTAACCCTGTTCTGGGACGGCGAGTTCCTGACTGGCACTCAGGCGATGACTGTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d810bcee6149994b7b84fbdacf6dc3deb7a95994181aa62bc47bd307837ee532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6768
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_IV) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank