Protein

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Genbank accession
ALP46887.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLNYFGQAFKLAFEVSPILLVDGIASKIPGGVMPIAVLTEGLSIANGLLHGEIHTRSMAAFTPMAGTTLVQQDICNLNFYNQVTAANATVRKPNRVVMQMIRPASTEDGGYTTKGMTFTALKMALDMHNQYGGCYTVMTPSFIYTRCLMRSFIDTSGFSEQNKQVQHTWQIEFEQPLSSVEQTVKTLASVLDKFDKGMPSDGPLSWSGIKNQVVQEFGIGL
Physico‐chemical
properties
protein length:222 AA
molecular weight: 24333,78270 Da
isoelectric point:6,41038
aromaticity:0,09009
hydropathy:0,01532

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46887.1 [NCBI]
Genbank nucleotide accession
KU052037.1 [NCBI]
CDS location
range 39000 -> 39668
strand +
CDS
ATGTCACTTAATTACTTTGGACAAGCTTTCAAACTGGCGTTTGAAGTTTCGCCCATTCTTTTAGTTGATGGCATAGCGTCGAAAATTCCCGGCGGGGTGATGCCGATTGCTGTTCTGACCGAAGGACTAAGTATCGCGAACGGTCTGCTGCATGGAGAGATTCATACACGCTCGATGGCGGCATTCACGCCAATGGCCGGGACAACGCTGGTCCAGCAGGATATTTGCAACCTGAATTTCTATAACCAGGTAACGGCAGCGAATGCGACCGTCAGGAAGCCTAACCGGGTAGTCATGCAGATGATCCGTCCGGCATCAACGGAGGACGGTGGCTACACCACGAAGGGGATGACGTTTACGGCGCTGAAAATGGCGCTTGATATGCATAACCAGTATGGCGGTTGTTATACCGTTATGACTCCCTCGTTTATCTACACGCGCTGTCTGATGCGGTCGTTTATCGATACATCTGGTTTCTCTGAGCAGAACAAGCAAGTGCAGCACACCTGGCAGATTGAGTTTGAGCAACCATTGTCGTCTGTCGAACAAACAGTAAAGACGCTGGCGAGTGTTCTGGATAAATTTGATAAAGGGATGCCGTCAGACGGGCCGCTATCGTGGTCAGGCATTAAGAACCAGGTCGTGCAGGAGTTTGGTATTGGCTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b3e2c4b20479afcf579efe776478900cd0adcc0a1ad9e08821c280608ee4378
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7264
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The chromosomal nature of LT-II enterotoxins solved: a lambdoid prophage encodes both LT-II and one of two novel pertussis toxin-like toxin family members in type II enterotoxigenic Escherichia coli (ETEC) Jobling,M.G. 2016-01-10 — GenBank