Protein

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Genbank accession
QGJ84342.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSKIADAEANATSLDGLVNDNGLIPTLRNGPKPSWQYLVDGWESQFTTLFADGEIQIDQIVTDLQTLGDAELSSLLIGITSQADSAIAGIQSDVSEKLEQVTIEADEAIESIQNDTASAIASAQNRTDAAVDQLTNDANELLDNIEQSALSRSKVSTPVTLSQGQTEITIAGFNASLSAYYVKDLNSDAPRYRLFSGANEDYTFDSVTTDTITLNQTYDAGTKVYAVSLDPAGAGVIKTDSQFSSVVDLRLSDVSVGTTATIPSLGNARYFITTGVTPLIGDIDFLDTRVGVLLPDDNQAFDVRWFGAVSGAAAQAAIFENAAIHARDYANDALSSNNRGNVSVPVGNWVIEYEIATEANWFIYGEIQGNPNYPGNNSDNLDRLNGRVYQTKVRGSGQLRVGATDVQWLQDIRTSILGTSSLECVSGTGQPGALFASRSSDGSGGTEGTIAAKFYVVNDNTSTQSVSYATYMEATKGEGAGTTFCGETNVTPYGTFRPIYPHLEYGNAAGITANHLFGGPVGSGAFDDTQTKTMTSAVAYISGGSAYRDDDPTKKYGFDAGFVFLNAAFETSEEKEIIRAGDNMKIAWFDTDGNRSTWIEGAGESGGNIHRISLASDSGGANTVYRLTNSEFACNKELALGTPNDRFSTGYFVNSPNVVSDRDKKTEIRGLTSDELNAGLELARNVKFFKWIDEVNKKGSENSYLHASVIAQEAYDILKSNNLDAKKYGLVSSQSGNWSVLPTELNMLMSAALVAEQDKIKSRLDALEA
Physico‐chemical
properties
protein length:769 AA
molecular weight: 82299,39170 Da
isoelectric point:4,39788
aromaticity:0,08453
hydropathy:-0,28362

Domains

Domains [InterPro]
DC_0783
STR
42–747
DC_0783
Coil
Unmapped
131–151
Coil IPR036388
IPR030392
CHP
660–769
IPR030392
IPR030392
CHP
660–719
IPR030392
QGJ84342.1
1 769
Architecture
STR
CHP
STR 42-747 | CHP 748-769
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage XCL1123
[NCBI] 		2655003 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas marina DSM 17587
[NCBI] 		1117316 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas > Pseudoalteromonas marina

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGJ84342.1 [NCBI]
Genbank nucleotide accession
MN313256.1 [NCBI]
CDS location
range 29966 -> 32275
strand -
CDS
ATGTCTAAAATAGCTGATGCAGAAGCTAATGCAACGTCCTTAGATGGCTTGGTGAATGATAACGGTTTGATACCAACTTTGCGAAATGGGCCTAAACCGTCTTGGCAATACTTGGTTGATGGTTGGGAGTCACAGTTTACAACGCTTTTTGCTGACGGTGAAATACAAATAGATCAAATCGTGACCGACTTACAAACGCTGGGCGATGCTGAATTATCAAGCCTTTTAATTGGGATAACAAGCCAAGCTGACTCAGCAATAGCAGGTATTCAGAGTGATGTTTCAGAAAAACTTGAACAAGTAACCATTGAAGCAGATGAAGCTATTGAAAGCATACAAAATGATACAGCAAGTGCAATAGCGTCCGCTCAAAACCGTACAGACGCAGCGGTTGATCAACTAACAAATGACGCAAACGAGCTTTTAGACAATATTGAACAAAGCGCACTTTCACGCTCTAAGGTTTCTACTCCTGTTACATTGTCGCAAGGGCAAACAGAAATAACAATAGCAGGGTTTAACGCATCGTTATCAGCTTACTATGTTAAAGATTTAAATAGCGATGCACCAAGGTATAGGCTTTTCAGTGGCGCTAATGAAGATTACACTTTTGATAGTGTAACAACGGACACTATAACTTTAAATCAAACGTATGACGCAGGAACAAAAGTATACGCTGTTTCTCTTGATCCAGCAGGTGCCGGAGTAATTAAAACTGATAGCCAGTTTTCATCTGTAGTCGATCTAAGATTAAGCGATGTCTCTGTAGGAACTACTGCAACAATCCCTTCACTTGGAAATGCTAGATACTTTATAACAACAGGCGTTACCCCGCTTATTGGCGATATAGATTTTCTTGATACTCGTGTGGGTGTTTTGCTGCCGGACGATAATCAAGCATTTGATGTTAGATGGTTTGGTGCGGTAAGCGGCGCAGCGGCACAGGCTGCTATATTTGAGAATGCGGCAATTCACGCTCGCGACTATGCAAATGATGCTTTATCATCAAACAATCGAGGCAATGTATCTGTACCTGTCGGTAATTGGGTTATTGAATACGAAATAGCAACAGAAGCTAACTGGTTTATTTACGGTGAAATTCAAGGAAACCCAAATTACCCAGGTAATAACTCTGATAATCTTGATAGATTAAACGGTAGAGTTTACCAAACTAAAGTTCGCGGTAGTGGTCAATTAAGAGTCGGCGCTACTGATGTACAGTGGCTGCAAGATATAAGAACATCAATACTAGGAACCTCATCACTTGAATGTGTTTCTGGTACAGGTCAGCCTGGTGCTTTATTTGCTAGCCGCTCAAGCGATGGTAGTGGTGGCACTGAGGGAACAATAGCCGCTAAGTTTTACGTTGTAAACGATAACACAAGTACGCAAAGCGTTTCTTATGCCACATACATGGAGGCAACGAAAGGCGAAGGGGCTGGCACTACTTTTTGTGGTGAAACAAACGTAACTCCATACGGTACTTTTAGACCAATTTACCCCCATTTAGAATACGGTAATGCAGCGGGTATAACTGCTAATCATTTATTTGGTGGGCCTGTAGGCTCTGGCGCTTTTGATGATACGCAAACAAAAACCATGACGAGTGCAGTGGCCTATATTTCTGGTGGTTCAGCTTATCGAGATGATGATCCAACAAAGAAATACGGGTTTGATGCTGGCTTTGTATTCCTTAACGCGGCTTTTGAAACATCAGAAGAAAAGGAAATAATCAGAGCAGGCGATAACATGAAAATCGCTTGGTTTGATACTGACGGAAATAGAAGCACATGGATAGAGGGTGCAGGTGAAAGCGGCGGCAATATACACAGGATTAGCCTAGCATCTGATAGTGGTGGAGCTAATACAGTTTACCGACTGACCAATTCTGAATTTGCATGTAACAAAGAGCTTGCGCTAGGTACGCCTAACGATAGATTTAGCACTGGTTATTTTGTTAACTCGCCAAACGTTGTTTCTGATAGAGATAAGAAAACAGAAATTAGAGGTTTAACTAGTGACGAGTTAAACGCTGGTTTAGAGCTTGCTCGAAACGTTAAATTCTTTAAATGGATTGACGAGGTAAACAAAAAAGGCTCTGAAAACTCATATCTTCACGCGTCTGTAATAGCTCAAGAGGCTTATGATATACTTAAATCTAACAACCTAGATGCTAAAAAATACGGTTTGGTTTCAAGCCAATCAGGGAATTGGTCTGTACTACCAACTGAGTTAAACATGCTTATGAGTGCGGCGCTAGTAGCTGAGCAGGATAAAATTAAATCACGCTTAGATGCGTTGGAGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa418b0212e3dc968277ec4b22020727942c05c4ac75d899fdd5cc64133525d2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Pseudoalteromonas Phage XCL1123 from the Yellow Sea, China Xue,C. 2018-12 — GenBank