Protein

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Genbank accession

WIU42463.1 [GenBank]

Protein name

tail protein

RBP type

TSP

Evidence RBPdetect

Probability 0,90

Protein sequence

MGKPMVTMSPGNNRSLKEPITDMILWSTFHLQWEKNSSYQLNFTAYDNSSAVYSQLDVESSIYYAGQEYIVKECIESFDTGVSTKEITALHVYMEIDRIYQHDMREGKKTYSIDDVVKYWLDGNSLGFTYEVHGSFDHQEIENLGNGSGKDMLSKVLDTWKTAVIFPDNRKIRIYTPDEFFKSQQRRVDYLHNSKSVKFDYNTLNIVNQVKCIGAKHTVELSNVTGSGNGTTTAVNGNWTEAIKNAANMMGVNLDDTGLSAILRRINQESGGSETVTNNWDSNAAAGHPSTGLLQYIQPTFEKWCVDGHTDIHKGFDQLLAMFNDSNWLADISVSGGWGPTGHKRMSKAKNDGTTKTTNGWGWPFPSVGEGTFMQSQKFGYDGGYRQNSFHDGLDFGSIDHPGSEVHAVHGGKVTAKAWGSGGINWYVVITDDGGLNVEYQEAFGSESNITVNVGDTVKTGQVIGYRTTDHLHIGITKMSIPAAFSHAFSNDGTWLDPQEIIKNGISSGDNSETVSVEVYYFEPFIVTDEESVKKWGVHPGQDVEDERFTDAESMRKYVLANKLHPEPDLSIEASFMGQDAYQPDAGEILRVQIPGKGYSESVQTVGFDRYPMANNSSVTLNATPTTILDYQRDRKRQIDSVLTSQKNLLSSVSTKVSNQEAQITQLLKSNGNDVSFNEETMERIKKFTEGGT

Physico‐chemical properties

protein length:	693 AA
molecular weight:	77042,37260 Da
isoelectric point:	5,14168
aromaticity:	0,09957
hydropathy:	-0,55368

Domains

Domains [InterPro]

G3DSA:6.20.110.10
ATT
10–89

G3DSA:6.20.110.10 G3DSA:3.55.50.40 cd13402 IPR011055

IPR044051
ENZ
12–91

IPR044051 G3DSA:3.55.50.40 cd13402 IPR016047

G3DSA:6.20.110.10
ATT
25–89

G3DSA:6.20.110.10 IPR010572

IPR050570
Unmapped
261–503

IPR050570

IPR011055
RBD
341–504

IPR011055

cd12797
ENZ
391–476

cd12797

WIU42463.1

1 693

Architecture

ATT

STR

ENZ

RBD

ENZ

ATT 10-89 | STR 90-181 | ENZ 182-244 | RBD 245-504 | ENZ 505-631 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:6.20.110.10	ATT	G3DSA:6.20.110.10	10	89	Merged direct domain	G3DSA:6.20.110.10	N-terminal	Low	Positional only	47 proteins / 47 hits
IPR044051	ENZ	DC_0346	12	91	InterPro cluster	Prophage endopeptidase tail, N-terminal	N-terminal	High	Text match	59 proteins / 59 hits
G3DSA:6.20.110.10	ATT	G3DSA:6.20.110.10	25	89	Merged direct domain	G3DSA:6.20.110.10	N-terminal	Low	Positional only	47 proteins / 47 hits
G3DSA:3.55.50.40	STR	G3DSA:3.55.50.40	91	181	Merged direct domain	G3DSA:3.55.50.40	Central	Low	Positional only	63 proteins / 63 hits
G3DSA:3.55.50.40	STR	G3DSA:3.55.50.40	91	175	Merged direct domain	G3DSA:3.55.50.40	Central	Low	Positional only	63 proteins / 63 hits
IPR010572	ENZ	DC_0675	100	631	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
cd13402	RBD	DC_0119	245	348	InterPro cluster	cd13402	C-terminal	Low	Positional only	6 proteins / 6 hits
cd13402	RBD	DC_0119	259	348	InterPro cluster	cd13402	C-terminal	Low	Positional only	6 proteins / 6 hits
IPR050570	Unmapped	-	261	503	InterPro	Bacterial cell wall metabolism enzyme	-	-	-	-
IPR011055	RBD	IPR011055	341	504	Merged direct domain	Duplicated hybrid motif	C-terminal	Low	Positional only	24 proteins / 24 hits
IPR011055	RBD	IPR011055	372	480	Merged direct domain	Duplicated hybrid motif	C-terminal	Low	Positional only	24 proteins / 24 hits
IPR016047	ENZ	DC_0060	390	478	InterPro cluster	M23ase, beta-sheet core domain	C-terminal	High	Text match	24 proteins / 46 hits
cd12797	ENZ	DC_0060	391	476	InterPro cluster	cd12797	C-terminal	High	Text match	24 proteins / 46 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WIU42463.1

1 693

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	236	236	0,9393
Central domain	237	682	447	0,2540
C-terminal	683	693	10	0,0359

Note: Constraints were applied during segmentation.
Fixed 4 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-236

Central
237-682

C-terminal
683-693

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Lacfervirus LFP01 [NCBI]	3430317	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Lactobacillus fermentum [NCBI]	1613	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

WIU42463.1 [NCBI]

Genbank nucleotide accession

OR048821 [NCBI]

CDS location

range 10469 -> 12550
strand +

CDS

ATGGGCAAACCAATGGTAACAATGTCTCCAGGCAATAATCGCAGTTTAAAAGAGCCGATCACGGATATGATCCTGTGGTCGACTTTTCATTTGCAATGGGAAAAGAACTCAAGCTATCAGCTGAATTTCACGGCTTACGACAACTCAAGCGCGGTGTACAGCCAACTAGATGTTGAATCATCAATTTATTACGCTGGTCAAGAATACATCGTTAAAGAGTGCATTGAGTCGTTCGACACCGGCGTTAGCACGAAAGAGATTACGGCATTGCATGTTTATATGGAGATCGACCGAATCTACCAGCACGACATGCGGGAAGGGAAGAAAACCTACTCAATCGATGATGTGGTTAAATACTGGCTTGATGGTAACTCATTAGGCTTCACTTATGAGGTGCACGGTAGTTTCGATCACCAAGAAATCGAAAATCTAGGCAATGGTTCCGGCAAGGATATGCTTTCTAAAGTCCTGGACACCTGGAAAACAGCGGTTATCTTTCCGGACAATCGTAAAATCAGAATCTATACACCAGACGAGTTTTTTAAGAGCCAGCAGAGACGTGTGGATTATCTCCACAACTCAAAGTCGGTCAAATTTGACTACAACACGCTTAATATTGTTAACCAAGTAAAGTGTATCGGCGCTAAGCATACCGTTGAGTTGTCTAATGTAACCGGCAGTGGTAACGGAACCACTACGGCTGTTAACGGTAACTGGACTGAAGCGATTAAAAACGCCGCTAACATGATGGGCGTTAATTTAGATGATACTGGGCTAAGCGCTATCTTGCGACGGATTAACCAGGAATCTGGTGGGTCTGAAACTGTCACTAACAACTGGGATAGTAATGCGGCCGCTGGCCACCCGTCAACCGGATTACTCCAGTATATTCAACCAACCTTTGAAAAATGGTGCGTCGATGGTCACACTGACATCCACAAGGGATTTGACCAGTTACTGGCCATGTTTAACGATTCTAACTGGCTGGCTGACATTTCGGTTAGTGGTGGCTGGGGGCCGACTGGTCATAAGCGTATGTCGAAAGCCAAAAACGACGGCACGACTAAAACTACCAACGGGTGGGGGTGGCCGTTTCCAAGTGTGGGCGAAGGAACGTTTATGCAATCACAGAAGTTCGGCTATGACGGCGGTTATCGTCAGAACAGTTTCCATGATGGCCTAGACTTTGGGTCCATCGATCATCCGGGAAGCGAAGTCCACGCCGTGCATGGCGGTAAGGTCACCGCGAAAGCGTGGGGATCCGGTGGAATTAACTGGTACGTGGTTATTACAGATGATGGCGGTTTGAATGTCGAATATCAGGAAGCATTTGGTAGCGAATCTAACATTACCGTCAACGTTGGTGATACGGTCAAAACTGGCCAAGTGATCGGCTACCGTACGACTGACCACTTGCATATTGGCATTACCAAAATGTCAATTCCAGCTGCGTTTAGTCATGCATTTAGTAACGACGGAACCTGGCTTGACCCGCAAGAAATCATCAAAAACGGTATCTCGTCAGGTGATAACAGCGAAACAGTGTCGGTTGAAGTTTACTACTTTGAACCGTTTATCGTAACCGATGAAGAGTCAGTAAAAAAGTGGGGTGTGCATCCTGGTCAAGACGTCGAAGATGAACGTTTTACCGACGCTGAATCAATGAGAAAGTACGTTTTAGCCAACAAACTCCACCCTGAACCGGATTTGAGCATTGAAGCGTCATTTATGGGCCAAGATGCTTACCAGCCGGACGCTGGTGAAATATTACGGGTACAGATACCTGGCAAAGGTTACAGTGAAAGCGTCCAGACAGTCGGTTTTGACCGCTATCCAATGGCTAACAACAGTTCAGTGACGCTCAACGCAACGCCGACCACGATTTTAGACTATCAACGTGACAGGAAGCGGCAGATCGACAGTGTGCTGACCTCACAGAAGAATTTGCTATCGTCAGTCAGCACAAAGGTAAGCAACCAGGAAGCGCAGATAACGCAACTGCTTAAGTCAAATGGTAACGACGTTAGTTTTAATGAAGAGACGATGGAAAGGATTAAAAAATTCACGGAAGGAGGGACGTAA

Genome Context

Tertiary structure

PDB ID

8b577d8b72a241c4a20af3525ce160f4c2e74e20f936f9201f669f3ff367ae1d

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8122

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence