Protein

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Genbank accession
AXC39386.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYFITLDQDTTLAPITGLIGGGKAASVYIYVKQDTTGNRNFTTDGTYAVVDGELNKTAGSVTIYQVIYDGVSPVTDLFIAQRTA
Physico‐chemical
properties
protein length:84 AA
molecular weight: 8987,96980 Da
isoelectric point:4,35656
aromaticity:0,10714
hydropathy:0,09167

Domains

Domains [InterPro]
IPR058970
RBD
1–72
IPR058970
AXC39386.1
1 84
Architecture
RBD
RBD 1-72 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CMSTMSU
[NCBI] 		2267248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39386.1 [NCBI]
Genbank nucleotide accession
MH494197.1 [NCBI]
CDS location
range 342796 -> 343050
strand +
CDS
GTGTACTTCATCACTCTAGACCAAGATACCACGTTGGCTCCAATTACTGGCCTAATTGGTGGCGGTAAAGCTGCATCAGTATACATCTATGTTAAACAAGATACAACTGGTAACAGAAACTTTACAACTGATGGTACTTATGCTGTTGTTGATGGTGAACTAAACAAAACTGCTGGTAGCGTGACCATTTACCAAGTAATTTATGATGGTGTAAGTCCAGTTACTGATTTGTTCATTGCACAACGTACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab4f5e3ab3d68af6e5ab95379417612a1b458083983a22d7a3131b6a3dacbc70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Escherichia phage CMSTMSU Lelin,C., Thirumalaikumar,E., Abinaya,A., Paul,S., Rashmi,R., Arun,A., Sudhakar,S. and Citarasu,T. 2018-10-11 — GenBank