Protein

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Genbank accession
WPJ72281.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSGTLTKFPTGSTQYKINFDYLSRKFVKVTLSNSLDATLNKELVVGNDYRFLSATTLEILASQSGFDVIQIYRQTSSELMVDFRDGSVLTSSDLTTAELQAIHIAEEGRDQTVEQAVQFAEAAEKSAEDAAASLSGIKDIIANNNIDSTIRSDLSKSDGYTMIGGLSERFSLPYKWVVVDNAPYNGDLEKAVSESSDGTGFLLGIGKSYDFLTFRNARNTKKNLTFVGGGVPELSADTRSLVAGTGTIIRGPMKTEAGGFQLVNLGVDCGGVVSDELLGGQWDDPIQCYGIGKEANVFIDNVKTLSHTNLTGPNYPGTHSLLLEILDGAYVGKVELIGGYHGLTLKGTNLDVMDAHCYGQRGDAFIIKSDSAATAADIYVGRLKVGLRDNSKFTDVTMGGIYDAHDGVNIDNVEIGSLQVYNASWGLIPSNENTGYISNLRIGNYVAMNVYGNYYSLVIDGRCVGVNIGEHQCSNTSGGISIDPSSVNVSLGNGFSKCATKSGYKLGGNSLVHGNLIADENGEYGVDYAGGLGFDASKVLGYSNPFGLVATEVSALGSTTGPKNGWGDTGDFSWVMHGKMSIVNGALIKGAGAVPYTSLPITAPRRRTRIAAWGVQGSSMIPVECYVEANGDLNVVGWESITDGNVINFSGQYLAK
Physico‐chemical
properties
protein length:656 AA
molecular weight: 69671,04740 Da
isoelectric point:4,86050
aromaticity:0,08537
hydropathy:-0,10427

Domains

Domains [InterPro]
DC_1263
ATT
1–197
DC_1263
IPR005604
ATT
12–114
IPR005604 DC_0478
WPJ72281.1
1 656
Architecture
ATT
STR
ATT 1-197 | STR 198-656
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ72281.1
1 656
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,9945
Central domain 186 545 361 0,9914
C-terminal 546 656 110 0,9889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-545
C-terminal
546-656

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CRW-SP4
[NCBI] 		3079600 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ72281.1 [NCBI]
Genbank nucleotide accession
OR464142.1 [NCBI]
CDS location
range 4246 -> 6216
strand -
CDS
ATGTCCGGAACTCTTACTAAATTCCCAACTGGAAGCACACAATATAAGATTAACTTCGACTACTTATCCCGTAAGTTTGTTAAAGTTACTTTAAGCAACTCTCTTGATGCTACCTTAAATAAAGAGCTAGTGGTTGGTAACGATTACCGCTTCCTTAGTGCAACCACATTAGAAATACTAGCCAGTCAATCTGGGTTCGACGTCATACAGATTTATCGCCAAACGTCTTCAGAGCTTATGGTTGATTTCAGAGATGGCTCAGTATTGACCTCATCCGACCTCACAACGGCTGAGCTTCAGGCCATCCATATCGCCGAGGAGGGCAGAGACCAGACGGTTGAACAGGCCGTGCAGTTTGCGGAAGCTGCTGAGAAATCTGCCGAGGACGCTGCCGCATCACTTAGCGGGATTAAGGACATAATCGCTAACAACAATATCGATTCAACAATCCGTTCAGACCTGTCCAAGTCGGATGGATACACAATGATTGGCGGACTGTCTGAACGATTCAGTCTACCCTACAAGTGGGTGGTAGTGGATAACGCTCCTTATAATGGCGACCTTGAGAAGGCCGTATCCGAAAGTTCAGACGGTACGGGATTCCTATTAGGTATAGGGAAATCCTACGACTTCCTTACATTCCGCAACGCTCGTAACACTAAGAAGAACCTAACGTTCGTTGGTGGAGGGGTCCCGGAGCTGTCTGCCGATACACGGAGCCTTGTTGCTGGTACTGGAACGATAATCAGAGGACCAATGAAGACTGAGGCTGGTGGGTTCCAGTTAGTGAATCTAGGCGTTGACTGTGGTGGCGTGGTGTCAGACGAACTTCTAGGCGGTCAATGGGACGACCCTATCCAGTGCTATGGTATTGGTAAAGAGGCAAATGTTTTTATAGATAACGTTAAAACCCTGAGCCATACAAACCTCACTGGTCCAAACTACCCAGGAACTCACAGCTTGCTTCTTGAGATTCTTGACGGAGCTTATGTTGGAAAGGTAGAACTGATTGGCGGCTACCACGGTCTGACCCTTAAGGGGACTAACTTAGATGTGATGGACGCCCACTGTTACGGACAAAGAGGCGATGCGTTTATTATTAAGTCTGACTCTGCTGCAACGGCTGCTGATATCTACGTCGGAAGACTTAAGGTAGGGCTTCGTGATAACTCTAAGTTTACAGATGTTACTATGGGCGGCATCTACGACGCTCACGATGGGGTTAACATAGATAACGTGGAGATAGGCTCTCTTCAGGTCTACAACGCATCATGGGGGCTCATTCCCTCAAATGAAAATACTGGTTATATCAGCAACTTGCGTATTGGGAACTACGTGGCTATGAACGTATATGGTAACTACTATTCGCTAGTGATTGATGGTCGCTGCGTTGGTGTTAACATAGGGGAGCACCAGTGTTCTAATACATCTGGCGGAATCAGCATAGACCCTTCCTCTGTTAACGTGTCATTGGGTAACGGATTCTCAAAGTGTGCCACAAAGTCTGGTTACAAGCTGGGTGGTAACTCTCTGGTTCACGGGAACCTGATAGCCGATGAGAATGGTGAGTACGGTGTTGATTATGCTGGTGGCCTAGGGTTCGATGCATCAAAAGTTCTAGGGTATAGTAACCCATTCGGTCTGGTGGCGACTGAGGTTAGCGCCCTTGGGTCAACTACTGGACCTAAGAATGGATGGGGAGACACCGGGGACTTTTCATGGGTAATGCATGGCAAGATGTCGATAGTAAACGGAGCCCTTATTAAGGGAGCTGGGGCTGTTCCATACACATCCCTACCAATAACGGCGCCTCGCAGGAGAACGCGCATCGCTGCATGGGGTGTGCAAGGGTCGAGCATGATTCCAGTCGAGTGCTATGTGGAAGCGAATGGGGACCTTAACGTCGTTGGCTGGGAGTCCATTACAGACGGAAACGTGATAAACTTCTCCGGTCAGTACCTAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e54a6e31706d5d2b8e3f0e93d3f705977f08d97f5707002956a5c4f3ed804da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50