Protein

View in Explore
Genbank accession
WNT47342.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDAKNASQWGRTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTASELGISQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVITAASWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGDKKELRGGSYWSAPLQYYIDGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47174,29060 Da
isoelectric point:6,09532
aromaticity:0,07883
hydropathy:-0,15811

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNT47342.1
1 444
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,7206
Central domain 214 412 200 0,0529
C-terminal 413 444 31 0,9994
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-412
C-terminal
413-444

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPLA11
[NCBI] 		3077594 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNT47342.1 [NCBI]
Genbank nucleotide accession
OR413576.1 [NCBI]
CDS location
range 43928 -> 45262
strand -
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGTGGCTGGGGTGCAACCCTTGGCTACTCTGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATTGGTAACCGTACTGACAAAGGTATACACTACATCCTTCAGCAGGGTGTTGATGTATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTGTACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACGCAGTGGCGCCCTGTACTCGACCTGACTGCAGCAACTGCTGCAGCACGACAGGTTGGTAAGGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGTTTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATATACCAGCTTCCAGCGTCAGGTACTGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCATATCAACTGGGATGCGAAAAACGCTTCACAGTGGGGACGCACCAAAGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAATAATACCTGGGGCGGATGGTCATACTCTTACGGGCCTGATAATAAACCTACGGCATCTGAGCTGGGCATTAGCCAGGACTTCATCCCTATGGATGGTTCTGACTCAATTCGCGGCAACTTAGGTACTGTAGGCTGGTTACATATTGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCCGCCGGTGTAGGTACTGTTGAGTATTCTGGTAACATCGCAGGCGGTACTGCTGTTCAGGAGTTACTGACTTCAGTTTCTGTAGCGGCTAACAGTAATGTTATCACTGCTGCTAGCTGGGGATCTGTGCCTATGTCGCACATCCAGCACATCCTTGTGGCTGGCGGTGCTACACAGATTAACATGGCAGTATGTCGCCCTGGTGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTTGATGGCCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCTGAGTCAACGTTCTACCCTGGGCATGTAATGACTGGCTGGCGCTTCGGCGATAAAAAAGAGCTGCGCGGTGGCTCGTACTGGTCAGCGCCGTTACAGTATTATATCGACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42fc95b97646553805e3e9c5c0e8438b9f1dc5de946bd4b6b3e1b24e3483beed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6624
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Collateral sensitivity increases the efficacy of a rationally designed bacteriophage cocktail to control Salmonella enterica Acton,L.J. 2024-03-19 — GenBank