Protein

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Genbank accession
URY13900.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAVVGVPGWIGSSAVNETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGNPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWAPNATAGGGGGRPFGLGGGGVNWPGGNASYDAPGGAGYTSQFGGGNGGDAGGRGGDGWGNHLSRSGGGAPGRAVFGSSPSWGATGTIYGSWI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26269,49860 Da
isoelectric point:7,85484
aromaticity:0,10811
hydropathy:-0,26178

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_1679
STR
6–170
DC_1679
URY13900.1
1 259
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-170 | RBD 171-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh27
[NCBI] 		2950773 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY13900.1 [NCBI]
Genbank nucleotide accession
ON528737.1 [NCBI]
CDS location
range 98746 -> 99525
strand -
CDS
ATGGCAGTAGTTGGAGTTCCTGGCTGGATTGGAAGTTCAGCCGTAAATGAAACGGGTCAGCGCTGGATGAGTCAAGCAGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCAAGAGAAATTATTCACACACTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCGCCTATAGTGTTTAATATCACCGGAAATTTGGTATCATATTCTAAAGACGTTCCTTTATTCTTCATGTATGGTGATACTCCTAACGAATATGTCACTTTGAATATTCACGGCGGTGTTCATATGTGGGGACGAGGTGGTAACGGTACTGTAAACGGAAACCCAGGCACAAATGGCGGCGATGTAATCCAAAATGATATCGGCGGAAGACTTCGTATTTGGAACTATGGCGTTATTGCATCAGGCGGTGGCGGTGGTGGTGCAGTGTCATTACAGAATAGCTGGGCGCCAAATGCTACAGCTGGTGGTGGCGGTGGCAGACCATTTGGTCTCGGTGGCGGTGGTGTTAATTGGCCGGGTGGTAATGCTAGTTATGACGCCCCGGGCGGCGCCGGTTACACTTCCCAATTCGGCGGAGGCAATGGCGGCGATGCTGGAGGTCGGGGCGGAGATGGATGGGGTAATCACTTATCTAGATCTGGTGGCGGTGCTCCTGGCAGAGCAGTATTCGGAAGTTCACCGTCATGGGGTGCAACAGGCACGATCTATGGTTCCTGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26237272e3a79b0bc3cf21ce3805c7f11be4a05e3c53b4cdbd78abd691074f22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8412
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank