Protein

View in Explore
Genbank accession
QOI66721.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MQILVNKRNEIISYAIIGGFEEGIDIENLPENFSQVFRPKAFKYSNGEIVFNEDYSEEKDDLHQQIDSEEQNTVASDDILRKMVASMQKQVVQSTKLSMQVNKQNALMAKQLVTLNKKLEEVKGETENA
Physico‐chemical
properties
protein length:129 AA
molecular weight: 14756,46740 Da
isoelectric point:4,76688
aromaticity:0,06202
hydropathy:-0,61473

Domains

Domains [InterPro]
IPR021358
STR
1–59
IPR021358 Coil
IPR021358
STR
1–55
IPR021358 DC_0472
Coil
Unmapped
52–72
Coil
QOI66721.1
1 129
Architecture
STR
STR 1-126 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage JD419
[NCBI] 		2776725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66721.1 [NCBI]
Genbank nucleotide accession
MT899504.1 [NCBI]
CDS location
range 33658 -> 34047
strand -
CDS
ATGCAAATATTAGTTAACAAGCGTAATGAGATAATTTCATACGCTATCATTGGTGGCTTTGAAGAAGGTATTGATATTGAAAATTTACCAGAAAATTTCTCTCAAGTTTTTAGACCTAAAGCCTTTAAATATTCAAATGGGGAAATAGTTTTTAACGAAGATTATTCAGAAGAAAAAGATGACTTGCATCAACAGATTGACAGTGAAGAACAAAACACAGTCGCTTCTGATGACATCTTACGAAAAATGGTTGCTAGTATGCAGAAACAAGTTGTTCAAAGTACAAAGTTATCGATGCAAGTTAATAAGCAAAATGCACTAATGGCAAAACAACTTGTGACACTTAATAAAAAATTAGAAGAGGTTAAAGGAGAGACTGAAAATGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
068a494c674cfa5708aa8740792dfb68ac1108c8934d34b444b61835cad0241a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7600
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of bacteriophage JD419, a Staphylococcal phage with an unusual morphology and broad host range Feng,T., Leptihn,S., Dong,K., Loh,B., Zhang,Y., Li,M., Guo,X. and Cui,Z. 2020 — GenBank