Protein

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Genbank accession
WAX22167.1 [GenBank]
Protein name
putative tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSNKPFPSSDLDVFKENSLILDNFVNSQENEHPDRFGRKRPTITGIIKEAFNVRTDISNMNETLIGQSRWDVVPKNTSLSLGGDNGALNKQAQALFNRTVMLKVHTREALRRTYQEVGLVLVPGSFEDGGVLETITDVLLEEKTGKVYSWTGSFPKVVAKGTSPTSEIEFLEQNIKSLYGMLSRTFDNDGIVFNTVELENTSLPIGTTIRVDGRYGGRFKIIPRGSKIPDGYFLLSVGGDKLAELQFSNILKPEWFGVFSNTPGTLESETADGLNAMFSALKNKTGLVFELNGVYYVNKQITVPFCETTSPHILRIFTISGKNSIIASSHQEKTLVIKTSSDIGQRNYGFSVEDLTLRNTVGWVKGTGLYIEGSFSPIFSRVFCHNFDKCFEIYCSSEVIFDKCVATTCNYGVYGDQLANPNGVNGNDYSVITYNQFVCFGFEKCAIRSNGGGSAKHIGGTMASPGLAARSFIQYQGSIRDVVIEDVLLECQNVTLDGCISFLGNGLKRSIKISGVVQEVISSPNNVLIRADGVENITIENIPFTVQGDVFEHIKYVRIDGAKVVSFINNARSYNYLNKVDLYDVEEVFVDGYNFIEINPQSTIRYTTTGEPVGIYTLNSYQPGELLDHTGKAGFKCSTVYNRLHFSELMAFLASKKPMISCAKVLTLSDALGVKLVNGNVNKGQYTYGCIPGRWKTQFFVLPTSGLTVVDSSVNGPVYFNIAGCSGVYMLTQENFYNPQIAIPESELNNITGWPVYKTLYNSDTTPNTPIGWVNTYGGKKAIKI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 86712,33220 Da
isoelectric point:6,09851
aromaticity:0,10560
hydropathy:-0,13270

Domains

Domains [InterPro]
DC_1559
ATT
1–204
DC_1559
G3DSA:2.10.10.80
ATT
120–170
G3DSA:2.10.10.80
WAX22167.1
1 786
Architecture
ATT
ATT 1-204 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAX22167.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 269 269 0,9958
Central domain 270 613 345 0,9740
C-terminal 614 786 172 0,9079
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-269
Central
270-613
C-terminal
614-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AVP1
[NCBI] 		3003735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX22167.1 [NCBI]
Genbank nucleotide accession
OP889247 [NCBI]
CDS location
range 54353 -> 56713
strand +
CDS
ATGTCCAGTAACAAACCTTTCCCATCGTCAGATCTTGACGTATTTAAAGAAAACAGTCTTATATTAGATAACTTTGTCAACAGTCAGGAAAATGAACACCCGGATCGTTTTGGTCGTAAGAGACCAACTATTACAGGGATCATCAAAGAAGCTTTTAACGTTCGTACTGATATTTCCAATATGAATGAAACTCTTATTGGTCAAAGTCGTTGGGATGTGGTTCCTAAGAACACCAGTTTGAGTTTAGGTGGTGATAACGGAGCTTTGAATAAACAAGCTCAAGCTTTGTTTAACCGCACTGTAATGTTAAAGGTTCACACAAGAGAAGCGTTGCGTAGAACTTATCAAGAAGTTGGTCTAGTTTTAGTACCTGGCAGCTTTGAAGATGGTGGTGTTTTAGAAACTATTACTGATGTTCTATTAGAAGAGAAAACAGGTAAAGTTTATAGCTGGACAGGTAGTTTTCCGAAAGTTGTCGCTAAAGGAACATCACCAACTAGTGAGATTGAATTTTTAGAACAAAATATTAAATCGCTTTATGGTATGTTATCAAGAACTTTTGATAACGATGGTATTGTTTTTAACACTGTAGAGTTAGAAAATACTTCACTACCCATCGGAACAACAATAAGGGTTGATGGGCGGTATGGGGGAAGATTTAAAATTATACCCAGAGGGTCGAAGATCCCTGACGGGTACTTTTTACTATCGGTCGGGGGTGATAAACTCGCCGAGTTGCAATTTTCTAATATTCTTAAGCCAGAATGGTTTGGGGTTTTTTCCAACACACCAGGAACATTAGAATCTGAAACTGCCGATGGTTTAAATGCCATGTTTTCAGCATTAAAAAATAAAACCGGGTTGGTTTTTGAACTTAATGGCGTTTATTATGTTAATAAACAAATTACAGTTCCATTCTGCGAAACTACTTCTCCGCATATCCTAAGAATTTTTACTATTTCAGGTAAAAATTCTATAATAGCAAGCTCACACCAAGAAAAAACACTAGTAATTAAAACTTCTTCAGATATCGGTCAGCGTAATTATGGATTTTCAGTAGAGGATTTAACACTTAGAAATACCGTAGGTTGGGTAAAGGGTACCGGGCTTTATATCGAGGGGTCTTTTAGCCCTATATTTTCTAGGGTTTTTTGTCATAACTTTGACAAATGTTTTGAAATTTACTGTTCATCCGAAGTAATATTTGATAAATGCGTCGCTACCACGTGCAACTATGGTGTGTATGGTGACCAGCTGGCTAACCCTAATGGAGTTAATGGTAACGATTACTCTGTCATTACTTATAATCAGTTTGTTTGTTTCGGATTTGAAAAATGTGCCATTAGATCTAATGGTGGTGGTTCAGCCAAACATATTGGCGGGACTATGGCATCCCCCGGGCTAGCAGCTAGGAGCTTTATACAATATCAAGGTTCTATAAGAGACGTTGTGATAGAAGACGTTCTCTTGGAATGTCAAAATGTTACATTGGATGGTTGTATATCATTCCTAGGGAATGGATTAAAACGTTCCATTAAAATATCTGGGGTGGTACAAGAGGTTATTTCTTCACCCAATAATGTTCTTATAAGGGCAGATGGTGTTGAAAATATTACTATAGAAAACATTCCATTTACGGTTCAAGGTGATGTATTTGAACATATAAAATATGTTCGCATTGACGGAGCCAAGGTTGTTTCCTTTATCAACAATGCTCGTTCTTATAACTATTTGAATAAAGTAGACTTATATGATGTAGAAGAGGTTTTTGTCGATGGATACAATTTTATAGAAATTAACCCCCAATCTACGATAAGATACACAACTACGGGTGAACCGGTTGGAATATACACACTTAATAGTTATCAGCCAGGTGAACTATTGGACCATACTGGGAAGGCTGGATTTAAATGTTCAACGGTATATAACCGTCTACATTTTTCGGAATTAATGGCTTTTCTTGCATCTAAAAAACCAATGATTTCTTGTGCCAAAGTTTTAACTCTTAGTGATGCATTGGGGGTTAAATTAGTCAATGGTAACGTTAACAAAGGTCAATATACCTATGGTTGTATTCCTGGAAGATGGAAGACACAGTTTTTTGTACTCCCTACTTCTGGATTAACCGTCGTAGATAGCAGTGTGAATGGACCTGTATATTTTAATATCGCAGGTTGTTCAGGAGTTTATATGTTAACGCAAGAAAATTTTTATAACCCGCAGATTGCGATCCCAGAGAGTGAATTAAATAACATCACCGGTTGGCCTGTGTATAAAACTTTGTACAATTCAGATACCACACCCAATACACCAATAGGTTGGGTTAATACATATGGTGGTAAAAAGGCTATTAAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a88fe759f5f01974370697dc7ced811df03634469a820d8f3df6093e8777f7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas veronii bacteriophage AVP1 Rai,S., Kaur,B., Nagar,V. and Tyagi,A. 2022-05 — GenBank