Protein

View in Explore
Genbank accession
QAX92069.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MALYRRGTASMDADGTVHGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTADDGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIASAIDMIAELDMNKLEQIVADVKSNKSDSQAAQNQAELARDAANSARDESNSIKNQTQQIADSAIGSINAAKDKAITNVQQKENSAITHIDSEEAAAIQAINDAKGDLSGYVNDAQTAAQTATSAKNDAQAARDAAVSSKDAAAVSAQEAQDAANSINAEMMEVKTML
Physico‐chemical
properties
protein length:272 AA
molecular weight: 28781,42270 Da
isoelectric point:4,44790
aromaticity:0,02574
hydropathy:-0,35588

Domains

Domains [InterPro]
DC_0313
STR
1–211
DC_0313 Coil
Coil
Unmapped
133–153
Coil
QAX92069.1
1 272
Architecture
STR
STR 1-211 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_SsoS_008
[NCBI] 		2507846 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX92069.1 [NCBI]
Genbank nucleotide accession
MK335533 [NCBI]
CDS location
range 37252 -> 38070
strand -
CDS
ATGGCTTTATATAGACGCGGTACTGCATCAATGGATGCAGACGGAACGGTTCACGGAACCGATACAAAATGGAAAGATCAGCTTGCTCTGATTCGAGTCGGTGCAACTATCGTATTCCTGGAGCAACCAATTAAGCTGGCGGTAATTAGCGATATTGTTAGCGATACAGAGCTAAAGGCTATCTCTACTGATGGTCAGACTGCCGATGACGGTAAGTATGTGATCTTGCTTAACGATTCGTTAACCGTTAACGGATTAGCTCAAAACGTTGCCGAGACGCTTCGATACTATCAAAGCAAAGAGACTGAGATCGCATCGGCTATAGATATGATTGCCGAGCTTGATATGAATAAACTTGAGCAAATAGTTGCTGATGTGAAGTCAAACAAATCTGATTCTCAAGCTGCGCAAAATCAGGCTGAGCTAGCGCGTGACGCAGCCAATTCAGCGCGTGATGAGTCTAACTCAATCAAGAATCAGACGCAACAGATTGCAGATAGTGCTATTGGTAGCATCAATGCGGCTAAGGACAAGGCTATCACTAATGTGCAGCAAAAAGAAAATTCAGCCATTACTCACATTGACTCAGAAGAAGCGGCGGCCATTCAGGCAATCAATGACGCGAAAGGCGATCTATCTGGTTACGTTAATGACGCTCAGACGGCAGCACAAACTGCAACCTCTGCAAAAAACGACGCCCAGGCAGCGCGTGACGCGGCGGTAAGCTCAAAAGATGCGGCTGCGGTAAGTGCTCAAGAAGCTCAAGACGCAGCTAACAGCATCAATGCTGAAATGATGGAAGTGAAAACAATGCTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
21b3234b0cfa63cf57549cd4a096b714b2aa6eaf7b3d62ab14c071db9ffc94a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8796
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting Shigella spp. and E. coli O157: H7 Shahin,K., Barazandeh,M., Bao,H. and Wang,R. 2020-06-17 — GenBank