Protein

View in Explore
Genbank accession
AWY03343.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MGGRKKGGGHTPYEAPESGQSKQFVSIVEVVSEGQIKGLVDGVKSVYLDNTPLQASDDSFNFKNVEAQGCIGTQDQDVLEGFNTSEKEIAVSTQVKKLTPITRTITDRKVSRLRLTLGVQSLFHQNDKGDVYGSKVDFTVTIGERSHLVSINGKYSSQYLKQVEFGDLPPVPFQVKVERMNADSKSQRLQNNTIWASYTEIIETQFAYPNTAILGIRFDSEYFSSIPNRTYEIYGIEMKVPSNYDPFERTYTGFWDGTFKIAWTNNPAWILYDLMTNKRYGLGWRLGEFNVDKWALYQAAQYCDQMVPDGFGGQEPRFTCNAWLTDQRKAYDVINDICSIFRAMPVWNGREFTVVMDRPADPVWTYTNANVIGGEFSYQYSAQKARHNEIHVEYVDASDSYERKIEVVSDDDLIRRHGLNVKKVTAFACTSRGQAFRTGKWILETERLETKTVTFAVGAEGLMHIPGDIIRVADCDYADTNIGGRVLAVNGRNVTLDKEISLWSNSYLTYIDGEAKHKDIRIVSKNGKEVTLESEPVGLAELGVWSLTTQEINVQLFRALTINEEKQGQYTIVALQHEPQKEAIVDNGAVFEPRETTLSTAGLDKVSHVNVQANGDGVALSFDYIVKHSAMIKYQIKLYKNGTFYKVYDDLTTPSHKFVGLPDGEYVAEIRAKNEQGQLSEAVTKSFNISFTVTELTTVSKVLGILLQWKNPVFANPNSAIEIWTNTEDRFETARKLVTLAYPTNSYSFDGLGVNETHYFWARMLDTANGNAGELTTSVVGVTESSGEKLVDYLQGQISRNAFSQALAEEITQIEKTGKRNESSMRKMQVFKTETHASSGRKLVAGIGIGVDGETEESQVIISAEKFVIADPNSNTLKTPFTVSTENGQARIAIAGDLIVKNSITGDKIQANTTITSPKIEGGHIKGNTFEGGVIRGARIEGLTGKFTGELEVTQIVGGNVLEVFACTSTHIGMSSRITYGQNPLYYIYYMRKMVKVLINSANVDRELFIIDPLSSISGRTYTSDFTRHRGGRDSDYIVSETTFMPGIRNLQARITLPNGVINEYKRSISIPRNETCAIDISYETLSDTSVNEDTFTFIAVVKSTSSKTISKV
Physico‐chemical
properties
protein length:1113 AA
molecular weight: 124000,97950 Da
isoelectric point:5,67312
aromaticity:0,09524
hydropathy:-0,34537

Domains

Domains [InterPro]
DC_0014
STR
1–1112
DC_0014
IPR053171
Unmapped
4–813
IPR053171 IPR015406
IPR055385
ATT
85–203
IPR055385 IPR032876
AWY03343.1
1 1113
Architecture
STR
ATT
STR
ATT
STR
STR 1-84 | ATT 85-203 | STR 204-324 | ATT 325-485 | STR 486-1112 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY03343.1
1 1113
Domain Start End Length (AA) Confidence
N-terminal 1 520 520 0,7904
Central domain 521 955 436 0,0592
C-terminal 956 1113 157 0,7325
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-520
Central
521-955
C-terminal
956-1113

Taxonomy

  Name Taxonomy ID Lineage
Phage Pasteurella phage Pm86
[NCBI] 		2201742 No lineage information
Host Pasteurella multocida
[NCBI] 		747 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY03343.1 [NCBI]
Genbank nucleotide accession
MH238467.1 [NCBI]
CDS location
range 48728 -> 52069
strand +
CDS
ATGGGTGGAAGAAAAAAAGGGGGAGGTCATACCCCGTACGAAGCACCGGAAAGTGGACAATCCAAACAATTCGTTTCTATTGTTGAGGTCGTATCCGAGGGGCAGATTAAAGGGTTAGTTGACGGCGTTAAATCTGTTTATTTAGACAATACACCGCTACAAGCTAGCGACGACAGTTTTAATTTTAAAAACGTTGAAGCGCAAGGGTGTATTGGCACGCAAGATCAAGATGTGTTGGAAGGGTTTAACACTTCTGAAAAAGAGATTGCGGTCAGTACACAAGTAAAAAAGCTTACACCGATTACACGCACGATCACGGATAGAAAAGTCAGCCGTTTACGGCTAACACTCGGAGTTCAGTCGCTTTTTCATCAAAACGACAAAGGTGATGTTTACGGATCAAAAGTTGATTTTACAGTAACAATCGGTGAAAGAAGTCATCTCGTTTCGATAAATGGAAAGTACAGCTCTCAATACTTAAAACAAGTTGAATTTGGCGACCTGCCGCCCGTTCCATTTCAAGTTAAAGTTGAACGCATGAATGCGGACAGTAAATCCCAGCGTTTGCAGAATAACACGATCTGGGCGAGCTACACTGAAATCATCGAAACGCAATTTGCGTATCCGAACACCGCAATTCTAGGCATTCGTTTTGATTCGGAATATTTCAGTTCAATCCCAAACCGAACATATGAAATTTACGGCATCGAAATGAAAGTGCCGAGCAATTACGATCCATTTGAGCGCACCTATACGGGGTTTTGGGACGGTACATTTAAGATCGCATGGACTAATAACCCAGCTTGGATTTTATACGACTTGATGACAAATAAACGCTATGGTCTTGGCTGGCGTTTAGGTGAATTCAACGTTGATAAGTGGGCGTTATATCAAGCAGCACAATACTGCGATCAAATGGTGCCGGATGGTTTTGGTGGACAAGAGCCAAGATTTACTTGCAATGCATGGTTAACAGATCAGCGCAAAGCATACGATGTGATTAATGACATCTGTTCAATCTTCCGCGCGATGCCGGTGTGGAATGGTCGTGAGTTCACTGTCGTGATGGATAGACCGGCAGATCCGGTGTGGACCTACACAAACGCTAACGTAATCGGTGGGGAGTTCTCTTATCAATATTCCGCACAGAAAGCGCGACACAACGAGATTCATGTTGAATATGTTGACGCAAGTGATAGTTATGAAAGAAAGATCGAGGTTGTTTCTGATGATGATTTAATTCGTCGTCACGGCTTAAACGTTAAAAAAGTGACAGCATTTGCTTGCACGTCACGCGGACAAGCGTTTAGAACAGGGAAATGGATACTTGAAACAGAGCGGTTAGAAACAAAAACAGTAACGTTTGCTGTTGGTGCCGAGGGGCTGATGCACATCCCGGGCGATATTATTCGCGTTGCAGATTGTGATTATGCGGACACAAACATCGGTGGTCGCGTTCTCGCTGTAAACGGTCGAAATGTCACGCTTGATAAAGAAATTTCGCTGTGGAGCAATAGCTATTTAACTTACATTGATGGTGAAGCGAAGCATAAAGATATTCGTATCGTCAGTAAAAACGGCAAAGAGGTTACGCTTGAATCTGAGCCGGTAGGACTAGCTGAACTTGGTGTTTGGTCTTTGACTACGCAAGAAATCAACGTGCAGTTATTTAGAGCGTTGACGATCAACGAAGAAAAACAAGGTCAATACACAATTGTCGCACTTCAACATGAGCCACAAAAAGAGGCTATCGTGGATAACGGTGCTGTGTTTGAACCGCGTGAAACAACACTTTCTACTGCCGGACTTGATAAAGTCAGTCACGTCAACGTACAAGCCAACGGTGACGGTGTTGCACTGAGTTTTGACTATATTGTCAAGCACAGCGCAATGATTAAATATCAGATTAAATTATATAAAAACGGAACGTTTTATAAAGTTTATGACGATTTAACAACACCAAGCCACAAGTTTGTGGGATTGCCGGACGGTGAATACGTCGCAGAAATTCGTGCCAAGAACGAGCAAGGACAGCTATCAGAAGCGGTTACTAAGTCATTTAATATCAGCTTTACCGTGACGGAATTAACGACCGTTTCGAAAGTGCTTGGGATTTTGTTGCAATGGAAAAATCCAGTCTTCGCTAATCCAAATTCCGCGATCGAAATCTGGACGAATACAGAAGATCGCTTTGAAACAGCAAGAAAACTCGTGACATTGGCTTATCCGACAAACAGTTATTCGTTTGACGGACTGGGCGTGAATGAAACGCACTATTTCTGGGCGCGCATGCTCGATACGGCAAACGGAAATGCGGGAGAGCTAACAACATCCGTTGTCGGTGTAACGGAAAGCTCGGGCGAAAAACTTGTTGATTATCTACAAGGACAAATAAGCAGAAACGCTTTTTCTCAAGCGTTAGCGGAAGAAATCACGCAAATTGAGAAAACAGGCAAGCGTAATGAAAGCAGCATGCGCAAGATGCAAGTTTTTAAAACAGAAACGCATGCTAGTAGTGGTAGGAAACTTGTTGCTGGTATTGGGATTGGCGTGGATGGCGAAACAGAAGAGTCGCAAGTCATTATCTCAGCAGAGAAGTTCGTCATAGCAGATCCGAACAGTAATACGCTTAAAACACCGTTTACTGTATCAACAGAAAATGGACAAGCCAGAATTGCGATTGCAGGGGATTTAATTGTTAAAAACTCAATCACTGGAGATAAAATTCAGGCAAATACGACGATAACCTCGCCAAAAATCGAAGGTGGCCACATTAAAGGTAACACGTTTGAAGGGGGAGTGATTCGTGGTGCAAGAATTGAGGGTTTGACGGGTAAATTCACGGGTGAGCTTGAAGTAACGCAGATTGTTGGTGGAAATGTTCTAGAAGTTTTTGCTTGCACATCAACACACATTGGAATGTCGAGCAGAATTACTTACGGACAGAATCCTCTTTATTACATTTACTATATGCGAAAAATGGTGAAAGTTTTAATCAACAGTGCAAATGTTGATAGAGAACTATTTATCATAGATCCGCTTTCTTCAATATCTGGTAGAACTTACACGTCTGATTTTACGCGACATCGTGGAGGGCGTGATAGTGATTATATTGTTTCAGAAACAACATTCATGCCCGGAATTAGAAATCTTCAAGCGCGGATCACGCTGCCAAACGGTGTCATCAACGAATATAAAAGATCAATTTCAATTCCAAGAAATGAAACTTGCGCGATTGATATTTCGTATGAAACATTGTCAGATACGTCTGTTAATGAAGATACATTCACATTCATTGCTGTTGTGAAATCAACGTCATCAAAAACGATCTCTAAAGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c95dc00ecca4926318318cbc34fab39c20dca1bc126b5f532e0bae877b0c866e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-inducible chromosomal islands are ubiquitous within the bacterial universe Fillol-Salom,A., Martinez-Rubio,R., F Abdulrahman,R., Chen,J., Davies,R. and Penades,J.R. — — GenBank