Protein

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Genbank accession
UYD60642.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKQYVLQQLLFSVLNDGQHELIFKKADDTHRVMRATRDPILVEVSERGSNAFKPADSQEVEKKERKESNVLNVVVYDIDAKGWRSFRIDRLVSINGTGIGTLAGLINSRPEYLNMGFTYDRYVEVAPKAVYFDVHTQDKSYIDDLVENASRFELISDKYGVKTWLVDEAANEF
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19958,23600 Da
isoelectric point:5,28150
aromaticity:0,10345
hydropathy:-0,43621

Domains

Domains [InterPro]
IPR024401
STR
15–93
IPR024401 DC_0553
IPR024401
STR
15–100
IPR024401
UYD60642.1
1 174
Architecture
STR
RBD
STR 15-100 | RBD 101-174
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM1
[NCBI] 		3246724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60642.1 [NCBI]
Genbank nucleotide accession
OP380606.1 [NCBI]
CDS location
range 38814 -> 39338
strand -
CDS
ATGTCAAAGCAATATGTTCTGCAACAACTCCTGTTTTCTGTTCTTAACGATGGTCAGCATGAGCTGATCTTCAAAAAGGCTGACGATACTCACCGGGTAATGCGAGCAACCCGCGATCCTATCCTGGTCGAAGTATCCGAACGTGGTAGCAATGCTTTCAAACCGGCTGATTCCCAGGAGGTCGAGAAGAAAGAACGCAAAGAGTCAAATGTTCTTAATGTCGTTGTTTACGATATTGATGCGAAAGGCTGGCGTTCATTCCGTATTGATCGTCTGGTCTCAATCAACGGCACTGGTATCGGCACACTTGCTGGCCTCATTAACAGTCGGCCAGAGTATCTCAACATGGGGTTCACATATGACCGTTATGTTGAAGTCGCTCCGAAAGCGGTTTACTTTGATGTCCATACTCAGGATAAATCGTATATCGACGATCTGGTAGAAAACGCGAGTCGCTTTGAGCTTATTTCTGACAAGTATGGTGTTAAAACCTGGCTGGTTGATGAAGCTGCAAACGAATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc1b10f06fad2ea041a5b4c7272b202748edb64ea018c2e91ff6c3d7b27b37bb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6053
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank