Protein

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Genbank accession
XVB82448.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MKQGDKTPIAIKLQQVSTSIRRDAEIPEQETVATVYLSDTKDRKVIYKEDFEVKLGTVTLVIDSVLPVGAYNLEIDYNGKKYPSDNSFSIIINHSATVAPEEIKSLETIQMVQDNVLTGVTPKVQALVDTKLSTEVANYINTNKAMLKGDKGDKMKFTDLTVSEKESLKGAKGDTTYLPPRIYTRDEFDALATKDPNTLYFISGV
Physico‐chemical
properties
protein length:205 AA
molecular weight: 22760,62380 Da
isoelectric point:5,19249
aromaticity:0,06829
hydropathy:-0,37415

Domains

Domains [InterPro]
IPR056923
RBD
184–203
IPR056923
XVB82448.1
1 205
Architecture
RBD
RBD 184-203 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mammaliicoccus phage phi36
[NCBI] 		3414227 Viruses >
Host Mammaliicoccus sciuri
[NCBI] 		1296 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB82448.1 [NCBI]
Genbank nucleotide accession
PV389078 [NCBI]
CDS location
range 30873 -> 31490
strand -
CDS
ATGAAACAAGGAGATAAAACTCCTATTGCTATTAAGCTACAACAAGTTTCAACTTCAATCAGAAGAGATGCTGAAATACCTGAGCAAGAAACTGTGGCAACTGTATACTTATCTGACACAAAAGATAGAAAAGTAATTTATAAGGAAGACTTTGAAGTTAAATTAGGAACAGTTACTTTAGTTATTGATAGTGTGTTACCTGTTGGTGCTTATAATTTAGAAATAGATTACAACGGTAAGAAATATCCTTCTGATAATAGCTTTAGTATTATTATTAATCATTCAGCAACAGTTGCTCCTGAAGAAATTAAATCATTAGAAACTATTCAAATGGTACAAGATAATGTTCTCACTGGAGTTACACCTAAAGTACAAGCATTAGTAGACACTAAATTAAGCACTGAAGTTGCTAATTATATAAATACTAATAAAGCAATGCTTAAGGGTGACAAAGGTGACAAGATGAAGTTTACTGATTTAACAGTATCTGAAAAAGAAAGTTTAAAAGGTGCTAAAGGAGATACAACATACTTACCTCCTAGAATTTATACAAGAGATGAGTTTGATGCTTTAGCTACAAAAGACCCTAACACTTTATACTTCATTAGTGGGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fda50a6928649e2f0c094097f0e24f034dd589e58f2d94ad5d166350d944e261
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterisation of phylogenetically distinct temperate phages from Kenyan Mammaliicoccus sciuri Cherbuin,J.D.R. 2025-12-01 — GenBank