Protein

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Genbank accession
XCO36943.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGDRLTYKGWRVYTENDRPTAEDINALSTINGGTVAKNATFNQSVTVGINLTANTLYSKSYVDITTGGAAPGILFKRSDLTGTPSSEQGIMQLTGLNASGVTLATLNINARADGGNRIYLNAYKNGTTNTSFVVDSANQLVSVEKGSFRVAGSSTFAAVSATTLNVSGAITANTVTPTDWTNHDNRYITGIPRSMQGNSFGAAVVTEKNDVLSVGGNVIDGPYGNTTYSGQVSTYRRTLNSGVSLVQTYYDTNSSWIRSGSGSPGAWSWSAGDANGWRRIYDTATPPTPAEVGAVNKAGDTMSGVLTLAPISQPLKTQGGGVFAYDGNVYINKVGFSGWIDDLFFKNTGGVVTGTIDQDWLNQNVYCTSALSHTATGSKNYLRRFRGGNGDQIWHETVQGGTYRLATGDTDSANLLTIESSGNMFLNGSQGGSSNLFLDADSNSVVWYRMINGTEKAVTFASSDGVYHIRTNNVRSNTWDFRAGMILNQGICSGTDYALIRGTPDGGGWDQWRERSSGLQIDMPNGATSAYNIWKATVWAATHVAAMDVHVPNNDASQARVRLIHQSNQYVYFNASGELTVSGNGSFNDVYIRSDERLKSNFSKIETALDKVDLLEGVIYDKAEHIGGEPTTREAGLVAQQLQKVLPEAVTIGEDTKGNEILGVSSSAVVALLVNAIKELREEIRELKSR
Physico‐chemical
properties
protein length:715 AA
molecular weight: 76335,54780 Da
isoelectric point:5,63072
aromaticity:0,08392
hydropathy:-0,28615

Domains

Domains [InterPro]
DC_0000
STR
1–715
DC_0000
IPR030392
CHP
619–715
IPR030392
IPR030392
CHP
619–676
IPR030392 Coil
XCO36943.1
1 715
Architecture
STR
STR 1-715
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36943.1
1 715
Domain Start End Length (AA) Confidence
N-terminal 1 326 326 0,1655
Central domain 327 525 200 0,2413
C-terminal 526 715 189 0,9508
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-326
Central
327-525
C-terminal
526-715

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146002
[NCBI] 		3232188 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36943.1 [NCBI]
Genbank nucleotide accession
PP889458 [NCBI]
CDS location
range 44370 -> 46517
strand +
CDS
ATGGCTGATTTGAAATTAGGCACAACGCTGGGTGGTGCGGGTATCTGGAGTGCGTCAAACCTCCCTCTGTTGCCCTCTGGCGACAGATTGACGTATAAAGGGTGGAGAGTATACACCGAAAACGATCGTCCAACAGCGGAGGATATAAACGCCCTCTCGACGATCAACGGCGGTACTGTTGCGAAGAACGCCACGTTCAACCAAAGCGTGACCGTAGGTATTAACTTAACAGCGAACACGCTGTATTCAAAAAGTTATGTCGATATCACCACGGGCGGGGCTGCTCCGGGTATATTGTTCAAACGTTCTGACTTGACCGGAACTCCGTCAAGTGAACAGGGCATTATGCAACTTACAGGACTTAATGCTTCCGGCGTTACGTTGGCAACTCTGAATATTAACGCCCGTGCTGACGGTGGCAACAGGATCTATTTGAACGCATACAAAAACGGAACAACAAATACTTCCTTTGTTGTTGATTCTGCGAATCAACTGGTATCCGTTGAAAAAGGTTCTTTCCGTGTAGCAGGATCATCGACCTTCGCTGCGGTGAGCGCAACCACGTTAAACGTAAGCGGGGCAATTACTGCTAATACGGTAACTCCTACTGATTGGACAAACCACGATAACCGTTATATCACGGGTATTCCTCGCAGTATGCAGGGAAACAGTTTTGGTGCTGCTGTTGTAACCGAAAAGAACGATGTTCTGTCAGTTGGTGGTAACGTGATCGATGGGCCTTATGGTAACACTACATATTCTGGTCAGGTTTCGACATATCGACGCACGTTGAATAGTGGTGTATCACTGGTTCAAACTTACTATGACACAAATTCATCATGGATTCGAAGCGGTTCTGGTTCTCCTGGTGCTTGGTCATGGAGTGCTGGTGATGCTAACGGTTGGCGACGGATTTACGACACGGCTACTCCACCAACTCCGGCAGAAGTAGGGGCAGTAAACAAAGCTGGAGATACCATGAGTGGTGTTTTGACCCTGGCACCTATTTCTCAACCGCTTAAAACGCAAGGCGGTGGTGTTTTTGCGTATGACGGAAACGTGTATATCAATAAAGTAGGATTTTCTGGATGGATTGATGATTTGTTCTTTAAAAATACAGGAGGTGTTGTAACAGGGACAATCGACCAGGACTGGTTGAATCAGAACGTATATTGCACGTCGGCATTGAGCCACACTGCAACAGGTTCGAAGAATTATCTTCGTCGTTTCCGTGGTGGTAATGGCGACCAGATCTGGCATGAAACTGTTCAGGGCGGCACGTATCGTTTAGCAACAGGTGATACAGACTCTGCAAATTTACTTACTATTGAAAGTTCCGGCAACATGTTTCTTAACGGTTCTCAAGGTGGTTCATCAAACCTATTCCTTGATGCTGACAGTAACAGTGTAGTTTGGTATCGTATGATTAATGGTACGGAAAAGGCAGTAACCTTTGCAAGTAGTGACGGTGTATACCATATTAGAACAAATAACGTCAGATCGAATACTTGGGATTTTAGAGCGGGTATGATTCTGAACCAGGGCATTTGTTCTGGTACTGATTATGCATTGATTCGTGGTACTCCTGATGGTGGTGGATGGGATCAGTGGCGTGAACGTTCCTCTGGTTTACAGATCGATATGCCTAACGGTGCTACCTCAGCATATAACATCTGGAAAGCTACCGTATGGGCAGCAACTCATGTTGCTGCTATGGATGTGCATGTTCCAAATAATGATGCTTCACAAGCCCGTGTTCGACTGATTCACCAAAGTAACCAATATGTTTATTTCAACGCGTCTGGAGAATTGACCGTATCCGGTAACGGTAGCTTTAACGATGTTTATATTCGTTCTGATGAAAGACTGAAAAGCAATTTCAGTAAGATCGAAACTGCATTGGATAAAGTAGACCTGCTGGAAGGTGTAATTTACGACAAAGCGGAACATATCGGCGGTGAACCTACTACCCGTGAAGCTGGTTTGGTCGCACAACAACTACAAAAAGTATTACCGGAAGCAGTTACCATAGGCGAAGATACAAAAGGAAATGAAATTCTGGGAGTTTCATCTTCTGCTGTTGTTGCTTTGCTAGTTAACGCAATTAAAGAACTTCGTGAGGAAATCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2df095e7c9dc3554ad0839f2c88eccb231b2f782f3e57a37db5244c5eeeb2704
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5964
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank