Protein

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Genbank accession
YP_010299507.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MNYKLFANSVVPQLTRLFAQATADDKSCYLVKLNSGFVEADLNKCLNYQPQTGAGYMFDAALAASSGICTVLAKGTNCVRTIDRTKLSISDCQLTATAEGVPTHLILGGILPVCLQVGPDVTLLYPDLVVRYDPNGYKTQVTINAFTIGLTQMWTENSVATWLTGNEKIAYGIGVFNTGAFTDLVGNAATTSGNLKFAADGSGVDLGTTGLISMASVPTFDPSKSFTIECDYHQSGNADYAEWCLFRTGASLTDRFTIAFDRSNEKGLLIWNNVGGGTAAAKITRPISPYAALWSGNTVHIKYEYDASTSTHKVSIDGTVVDTFTYAVLKPVAVSAQVAGGYGAGANAAYTPIINNYAIRQGA
Physico‐chemical
properties
protein length:363 AA
molecular weight: 38517,07510 Da
isoelectric point:5,56990
aromaticity:0,09917
hydropathy:0,08815

Domains

Domains [InterPro]
DC_0447
STR
1–185
DC_0447 G3DSA:2.60.120.200
IPR013320
STR
207–333
IPR013320
YP_010299507.1
1 363
Architecture
STR
STR
STR 1-185 | STR 207-355 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010299507.1
1 363
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,7060
Central domain 16 214 200 0,0243
C-terminal 215 363 148 0,9685
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-214
C-terminal
215-363

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_22
[NCBI] 		2869549 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010299507.1 [NCBI]
Genbank nucleotide accession
NC_061440 [NCBI]
CDS location
range 52795 -> 53886
strand -
CDS
ATGAACTACAAGTTATTTGCAAACTCTGTCGTGCCTCAGTTGACGCGTCTATTCGCTCAGGCAACGGCAGACGATAAGTCCTGCTATCTGGTGAAACTGAATAGCGGATTCGTTGAGGCTGATCTGAACAAGTGCCTTAATTATCAGCCTCAGACTGGTGCGGGTTACATGTTCGATGCCGCTCTTGCTGCGTCTAGCGGTATCTGCACCGTGCTGGCGAAAGGCACTAACTGCGTCCGTACTATTGATCGTACCAAGCTGTCTATCTCTGATTGCCAGTTGACTGCTACTGCCGAAGGTGTTCCTACTCACCTTATTCTCGGCGGCATCTTGCCTGTGTGCTTACAAGTTGGGCCAGACGTTACGCTGCTCTACCCTGACCTTGTTGTCCGCTATGATCCGAATGGATATAAGACTCAGGTAACGATCAACGCATTCACTATCGGCCTGACTCAAATGTGGACAGAGAACTCAGTTGCTACGTGGCTTACAGGCAATGAGAAGATCGCATACGGTATCGGTGTTTTCAATACCGGCGCATTCACAGACCTCGTAGGAAATGCGGCTACCACCAGCGGTAACTTGAAGTTTGCTGCGGATGGTTCTGGAGTTGACTTAGGCACTACTGGCTTAATCAGTATGGCGTCTGTACCTACGTTTGACCCTAGCAAGTCATTCACTATTGAGTGTGACTATCACCAGTCAGGTAATGCGGACTATGCGGAATGGTGTTTGTTCCGTACTGGCGCATCTCTGACTGACCGTTTCACCATAGCGTTTGACCGTTCTAACGAGAAAGGTCTACTCATCTGGAACAACGTTGGTGGCGGTACTGCCGCAGCAAAAATAACGCGACCTATCTCGCCTTACGCAGCACTGTGGTCAGGCAATACCGTACACATTAAATATGAGTACGATGCCTCGACGTCTACGCACAAGGTGTCTATTGACGGTACCGTTGTAGATACATTCACGTATGCTGTTCTCAAACCTGTTGCTGTATCTGCTCAGGTAGCTGGTGGTTACGGTGCTGGTGCGAATGCTGCTTACACTCCTATCATCAACAACTACGCGATCCGCCAAGGAGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d1970a0c646ac44fc5f4118d41adea70664a86395c7ac9654f18bc369094bb7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_22 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank