Protein

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UniProt accession
A0A8S5SD61 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MIDAKDFLSVTRDIIEQQIRDRSTDAVCEIESVNEDGTLNVFVLPDKQTILKNIINESRYNFKRGDNALLYKIHNRLSDSFVVAKFRPKQEDAGISEKSVQNLIDNALQNYQGGSGGGVSGGIQGPPGPQGAQGEVGPTGPTGAAGEDGSVGPTGEKGEKGDPGLTTKVTVNGITYTQVDGNITLPDYAKIGTAETNQVLSKIEYLAEADIPTNPDETYEYAITDLIGYADLDANLQEQIDHMGNTGPTGPTGAIGPTGETGAIGPTGPMDEDAFVEATIGSTGVVTFTKQNGQQVNLNLAYFDETAVAGYNIHSYTISENDWVGNVAPYTHTKTAADGNWVATQNLLVQMRLLDETPFEGVHAKYTVSADGAVTVSADSKLKLQVLVADGLVAGPKGEVGATGPQGLVGPTGATGALGPTGSVGPTGEAGTKGDTGAVGPTGQTGPIGPTGKEGALGPTGPTGSLGPTGPLNKDAFVDAVVNPTGTVVFTKDNGQTVVLQFAQIEGSSIAGYNIHSYKIAQADWSGTQAPYTHTKSATAGGWVSTQDLLVQIRLDDNSPYEGIHTQYKVANNGDVTIISDTKADLQILVADGLVAGVKGDTGAIGPTGEKGEQGDKGNTGPVGPTGQTGAVGPTGATGAVGPTGEKGEQGIQGPKGDTGPVGPTGQNGATGDTGAVGPTGLTGPTGPTGPTGANGPTGPLNENAFVDASTGPTGTVVFTKQNGQTVALQFGQIAGTDYAGYNIHSYDITTTSWTGTGPYTNTKTAADGGWTPTKDVLVQMRLSDGMPYEGVHAKYTVANNGTVVITSDAKLALQILVADGLIVGQKGPTGPAGANGADGSVGPTGPRGAVGPTGERGEMGPTGERGPAGASGSSSGGGISDVLNPVGCISFYSYDGAFSVTPNYDGNVSSLSYSIDLGKTWTDIEASGTSIASSTVLPESETTNIINYILFRGLGNSVITGENSTPWTITDTTAVFCAGDITTLLDYQYPPDIITEPYCFANMFLNQTSLVSAPRLPSIEVSDHCYYKMFQGCTSLTFSPELPARKVIDSAYEQMFMGCEQLTTPPQINGRSFSSRACFEMFNGDANLNRAPEMMIVESATDSFENMFMGVSGLEIYESSSFTTSQTDSVLICDIKDSGNFTFASLTGYNSNIYRYYVENQPVPLQFSGADSAMLTEYIITHSILDSQNN
Physico‐chemical
properties
protein length:1191 AA
molecular weight: 123074,25120 Da
isoelectric point:4,36276
aromaticity:0,06969
hydropathy:-0,27187

Domains

Domains [InterPro]
DC_0057
STR
28–390
DC_0057 IPR050149
DC_0841
STR
360–503
DC_0841 IPR008160 DC_0431
IPR008160
STR
395–449
IPR008160 DC_0656
DC_1453
STR
637–821
DC_1453
A0A8S5SD61
1 1191
Architecture
STR
STR 28-1146 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctnpt50
[NCBI] 		2827941 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF48909.1 [NCBI]
Genbank nucleotide accession
BK032577 [NCBI]
CDS location
range 94613 -> 98188
strand -
CDS
ATGATCGACGCAAAAGATTTTTTAAGTGTAACAAGAGATATAATTGAACAGCAAATTAGAGATCGTTCGACAGATGCTGTTTGCGAAATTGAGAGTGTCAATGAAGACGGAACTCTCAATGTTTTCGTTTTACCGGATAAACAAACAATACTCAAAAACATAATCAATGAATCTCGGTATAACTTCAAGCGCGGAGATAACGCGCTGTTATATAAAATCCATAATAGATTGTCGGATTCATTTGTTGTCGCAAAATTTCGCCCAAAGCAAGAAGATGCTGGAATTTCTGAAAAGTCAGTTCAAAACCTTATAGATAATGCTCTACAAAATTATCAAGGTGGTTCTGGTGGCGGAGTTTCTGGTGGAATTCAAGGCCCTCCCGGCCCGCAAGGAGCTCAAGGAGAAGTTGGTCCCACAGGTCCAACGGGCGCAGCTGGAGAAGATGGTTCTGTTGGACCAACAGGAGAAAAAGGAGAAAAGGGAGATCCTGGTCTAACGACAAAAGTTACCGTTAACGGAATAACTTATACGCAAGTTGATGGCAACATTACTCTTCCTGATTATGCGAAAATTGGAACAGCTGAAACCAATCAAGTATTGTCGAAAATTGAATATCTTGCAGAAGCGGATATTCCAACAAACCCAGACGAAACATATGAATACGCGATTACCGATTTGATCGGATATGCGGATTTAGACGCGAATCTTCAAGAACAAATTGATCATATGGGAAATACCGGTCCCACTGGTCCAACCGGAGCAATCGGACCTACAGGAGAAACTGGTGCGATTGGTCCAACCGGTCCAATGGACGAAGATGCTTTTGTCGAAGCAACGATTGGTTCAACTGGTGTCGTAACATTTACAAAACAGAACGGACAGCAGGTTAACCTTAATCTTGCTTATTTCGATGAAACAGCGGTGGCTGGTTATAACATTCATTCCTATACGATATCTGAAAATGATTGGGTTGGGAATGTGGCGCCGTATACACATACAAAAACGGCGGCAGATGGAAATTGGGTTGCGACACAAAATCTTCTCGTCCAAATGCGGCTTCTTGATGAAACTCCATTTGAGGGAGTGCACGCAAAGTATACTGTTTCCGCAGATGGCGCAGTCACTGTTTCTGCCGATTCAAAGCTAAAACTACAAGTTCTTGTTGCAGACGGACTTGTTGCTGGACCTAAAGGGGAGGTTGGCGCTACTGGTCCGCAAGGACTTGTTGGACCTACTGGAGCAACCGGGGCTCTTGGACCTACTGGCTCTGTTGGTCCAACAGGTGAAGCTGGAACAAAGGGTGACACGGGAGCTGTTGGACCAACAGGACAGACAGGTCCAATCGGACCAACTGGTAAAGAAGGCGCTCTTGGCCCTACTGGCCCGACTGGTTCTCTTGGACCCACTGGTCCGTTAAATAAAGACGCTTTCGTGGATGCGGTCGTAAATCCAACTGGAACTGTCGTATTTACCAAAGACAATGGGCAGACAGTGGTTTTACAATTTGCGCAGATCGAAGGAAGTTCAATTGCGGGATATAACATTCACTCCTACAAAATCGCACAAGCCGATTGGAGCGGAACACAGGCTCCTTATACACATACAAAATCTGCGACTGCTGGTGGATGGGTTTCTACGCAGGATTTGTTAGTACAAATTCGTCTCGACGATAATTCGCCTTACGAAGGAATTCATACACAGTATAAAGTCGCAAACAATGGCGATGTTACAATTATTTCCGACACCAAAGCCGATTTACAAATTCTCGTGGCTGATGGACTTGTTGCCGGGGTGAAAGGCGATACGGGTGCTATCGGCCCTACGGGAGAAAAGGGTGAACAGGGCGACAAAGGTAATACAGGACCTGTCGGTCCGACTGGTCAAACAGGAGCTGTTGGTCCTACCGGCGCTACAGGCGCAGTTGGTCCCACTGGTGAAAAGGGAGAACAGGGAATTCAAGGTCCTAAAGGCGACACGGGGCCGGTCGGTCCAACTGGACAAAATGGGGCGACTGGTGATACTGGAGCAGTTGGACCTACTGGTTTAACCGGACCTACCGGTCCAACAGGTCCTACGGGAGCAAATGGACCAACCGGTCCTCTAAACGAAAATGCATTCGTTGATGCTTCTACCGGTCCTACGGGAACGGTTGTGTTTACGAAGCAAAATGGACAGACGGTCGCGCTACAATTTGGTCAAATCGCTGGAACGGATTATGCTGGTTATAACATTCATTCTTACGATATTACCACAACGAGCTGGACTGGAACTGGACCGTATACAAATACCAAAACCGCTGCTGACGGAGGATGGACTCCTACAAAGGACGTTCTCGTTCAGATGAGATTATCTGACGGAATGCCTTATGAAGGAGTACACGCCAAATATACAGTTGCGAACAACGGAACGGTTGTTATTACGAGCGACGCAAAACTTGCTCTTCAAATTTTAGTTGCAGATGGTTTAATTGTTGGGCAGAAAGGTCCAACCGGACCTGCCGGAGCAAATGGCGCAGACGGATCTGTTGGTCCAACCGGTCCAAGAGGTGCCGTTGGTCCTACTGGAGAAAGAGGAGAAATGGGACCAACTGGAGAAAGAGGTCCTGCTGGCGCCAGTGGAAGTAGCAGTGGTGGCGGGATATCAGATGTTTTAAACCCGGTTGGATGCATCTCGTTTTATTCTTATGATGGTGCGTTTTCCGTTACTCCAAATTATGATGGAAATGTTAGCAGTCTTTCTTATTCTATTGATTTGGGAAAAACGTGGACTGATATTGAAGCTTCTGGAACGTCTATAGCTTCTTCTACAGTGTTGCCGGAATCTGAAACCACTAATATTATTAATTACATTTTATTCCGGGGACTTGGAAATTCCGTTATTACAGGAGAAAATTCAACCCCGTGGACGATTACTGATACAACGGCTGTGTTTTGTGCTGGTGATATAACCACATTGTTGGATTATCAATATCCTCCAGATATTATAACCGAGCCATATTGTTTTGCGAATATGTTCTTGAACCAAACAAGCCTTGTTTCAGCTCCAAGGCTTCCGTCGATAGAAGTGAGTGACCATTGTTATTATAAAATGTTTCAGGGGTGCACGTCGTTAACGTTCTCTCCGGAACTTCCTGCAAGAAAAGTGATAGATTCAGCCTATGAGCAAATGTTTATGGGGTGCGAACAGTTAACAACGCCTCCGCAAATTAACGGGAGATCTTTTAGTAGTAGAGCTTGTTTTGAAATGTTTAATGGAGATGCCAATTTAAATAGAGCTCCAGAAATGATGATCGTTGAATCTGCCACCGATTCTTTTGAAAATATGTTTATGGGAGTTTCTGGGCTTGAAATATATGAATCATCTTCGTTTACGACATCTCAAACAGATAGTGTGCTAATATGCGATATAAAAGACAGCGGAAACTTTACGTTCGCCTCCCTTACGGGATACAATTCTAATATTTATCGATATTACGTTGAAAATCAGCCTGTTCCTCTTCAATTTAGCGGGGCAGATTCTGCGATGTTAACAGAATATATTATCACTCATTCTATTTTGGATTCTCAAAACAATTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
dd1a4ed416d100c4935f55e12f10f01d5e40277dee822972467e4ab8a7abeff6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4332
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50