Protein

View in Explore
UniProt accession
A0A1X9I9Y8 [UniProt]
Protein name
Phosphodiester glycosidase domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAKNLLLYDKYNKVINTTMDVKGTTGYITIENLIPDTDYPEGEFYVGWEVEGKILPKATVPEFTTLRQMREKLVIVYFSDLTEQQLVDIKGDSAYKVALDNGFNGTQKEWLESLKGEQGEQGEPGKPGRDGVDITEGGSAYEIALAEGFQGTREEWLESLKGEPGEPGEKGDPGEDGFGVDGASAYEIALENGFVGNIQDFLDSLVGEPGKDGQDGQDGLSAYQIALENGFTGTEQEWLETLKGGLTGTENWQKRKVTSDDGTVITVDKPNLNAPDTYFTNSGFYYVTTSTGFPEGVSANGYVTFLIRNPNYSIMTFQPYNSERVFTKAKLNGNWGFWNEIGGRKEDRITSDYVVEIVMNTIENEISILRSTINEDSMYSEIDYLSYIDSVTDTKYTVTTIPTEDSNGYPIKLNRGYANDDPNDGSLETAREFALRKNASFVTNASVFDTSTGKLLGRQMDNGTIINNTPHRENYTLTIDNDRTLNAIPSTTNLEDITTSIDALTAFFPIILNGEKVDPSVYSSIPNTGEKNPRQIIAQKEDGTILVISVQGRGINGQGMDYEDTYRICSELGVKFAYHLDGGGSMQTNVRGSIITNPIDENGTKERKVKDFLYVTISEDIRKNRSNQKEFSNHSKNISDIQVKMDKLSKDFANMGTIPNVGDFKDTATFVSDANTIRQSGMYWVTNATLNTPKDYSYGLFHWQVNPTSALQMIVPFHINLGETLIRRTNGSMDAWTSWRFPGSKLDSIMDKVYKTRTSVNNIYVSKSGTNNGDGTENNPFNTIQKAVDSIPKLIEKDHFIKVDEGEYDENVIVKGIIGSAVWISRKNGIVDPSLGSTGVKVKSITFFDCVSYCKVESIESFNSSGISGQSFIRFSRCAYGTVHACRMADSSITVPSLIWDGSGGGFNSCYFDNQRTCVISMNGSAIRNDATNTHGTNKSDKGMVVQAGDVYYNGNVTWMTGATKPEELTQSGNINREPVTIELTTKNSWVHYNDDYKAKAIKMPDGMVYLYGIVKGGTPAQGSVAFTLPIWFRPRDKQIFGAFVADSTISKVLLDTTGNFAIETGTQGQYISLSGISFYAGN
Physico‐chemical
properties
protein length:1083 AA
molecular weight: 119516,50400 Da
isoelectric point:4,79115
aromaticity:0,09880
hydropathy:-0,46473

Domains

Domains [InterPro]
DC_1473
STR
13–134
DC_1473 DC_1967 cd19958 PTHR40446 cd19958 IPR011050
DC_1473
STR
118–178
DC_1473 DC_1473 DC_1962
IPR018711
STR
438–616
IPR018711 IPR012334
A0A1X9I9Y8
1 1083
Architecture
STR
ATT
STR
STR
STR
STR 13-167 | ATT 168-217 | STR 218-648 | STR 671-740 | STR 759-1006 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1X9I9Y8
1 1083
Domain Start End Length (AA) Confidence
N-terminal 1 434 434 0,8502
Central domain 435 672 239 0,4796
C-terminal 673 1083 410 0,3410
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-434
Central
435-672
C-terminal
673-1083

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SscM-2
[NCBI] 		1868845 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
ed670f71b1b31d54d8f61ed8ec7858941d4982c70e40b1a31bb9fe62141a3a53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50