Protein

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Genbank accession
YP_007517727.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATLSNKIKQYVNSEVDFTSDVILQDDGNGAYIKEWNLDIAQPTDAQLSSVESDADKMERNNQVIATRKSLYGSWEKQLEEINEQGIDAWKARIAQIKSDNPKE
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11791,85960 Da
isoelectric point:4,54964
aromaticity:0,06731
hydropathy:-0,82115

Domains

Domains [InterPro]
DC_0890
STR
1–104
DC_0890
IPR035950
STR
3–61
IPR035950
IPR019094
STR
8–59
IPR019094
IPR035950
STR
15–57
IPR035950
YP_007517727.1
1 104
Architecture
STR
STR 1-104
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC010P
[NCBI] 		1283077 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007517727.1 [NCBI]
Genbank nucleotide accession
NC_020481.1 [NCBI]
CDS location
range 20708 -> 21022
strand +
CDS
ATGGCAACTTTAAGTAATAAAATAAAACAATATGTAAATTCAGAAGTAGATTTTACTTCTGATGTAATTCTTCAAGATGATGGTAATGGTGCATATATTAAAGAATGGAATTTAGATATTGCTCAACCAACAGATGCTCAACTTTCATCAGTAGAAAGTGATGCAGATAAAATGGAAAGAAATAATCAAGTTATAGCAACAAGAAAATCTTTATATGGCTCTTGGGAAAAACAATTAGAAGAAATTAACGAACAAGGTATTGATGCTTGGAAAGCAAGAATAGCACAAATTAAATCAGATAATCCAAAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26d2cc09a004db5dd462d3776f09a403b0f44f827aee60ce672e624f313ac276
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9645
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50