Protein

View in Explore
Genbank accession
XCO39922.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQEYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSIVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPRNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDIEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYIADPHWQSAFNLVLSGRIMEVSGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPSKYDAIDNGVITDSRPTSVVDPDSLGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGSEDTAYIELYQSQSGTDQDASLLTLIPYPASEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDVILDEILDSDAMKELQESAQDSAAKLNEYANSILHNAIANDADVRIMRKENGKRKAEIKKTESLIADESQARATQINELRVEFDEELTASIKQVNDAIATESDTRATQIDQLNATFTTEIGGVKTDMNAGFTQVNEAIASESDARASSEAALDAKIGQNSAALDQKLDSWADVNGVGSMYTMKLGLKYNGQEYNSGMALQLTASGGSVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNSALIQDGSINNAKIGNFIQSNNYVENQSGWAINKDGGAQFNNAIFRGTIYATDGIFKGTVQAERFIGDIATSASFNGFTIKGGEGAGTMNAWYQNSGYPMTITMNCTVRCNSYSGGVADQSNDFFVVLTFNINGVQSTRRVVVDMREKARGLVDIPQSFTVNIPASNSRIGISLRGESFGPQQSEVTVGNIVVTAFRSNNGSFGQ
Physico‐chemical
properties
protein length:1276 AA
molecular weight: 140509,54390 Da
isoelectric point:4,78882
aromaticity:0,09483
hydropathy:-0,27547

Domains

Domains [InterPro]
DC_0014
STR
1–1271
DC_0014
IPR053171
Unmapped
3–869
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
XCO39922.1
1 1276
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1271 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39922.1
1 1276
Domain Start End Length (AA) Confidence
N-terminal 1 501 501 0,8467
Central domain 502 1023 523 0,0670
C-terminal 1024 1276 252 0,5879
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-501
Central
502-1023
C-terminal
1024-1276

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146037
[NCBI] 		3232217 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39922.1 [NCBI]
Genbank nucleotide accession
PP889487.1 [NCBI]
CDS location
range 15729 -> 19559
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCAAGCAAGCCACGCACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTATTGCTTGCTGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGAATACATTCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTACTGACTCAAAAAGATAACGGCGATATGGTCGGATCGATTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGCGTTAGTCGAGTAACTCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGAAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGATAAGTGGTCGCTGTATGAGGTGGCGCAATATTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAGCCGCGCTATTTGATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCAATTATCGTCGATAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGACGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATATTGAACCAGTATTCAACCCGGACGCAGCCATGCGATTTGGCCATAACCCAACGAGCATTACAGCGATCGGGTGCACCAGAAGGACGGAGGCGAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCGACAACCGTTTCGTTTTCTACTGGCCTGGAAGGCATGATTCCTTCTTGCGGCGATGTAATTTACATTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTTTCAGGGCGAATCATGGAAGTATCCGGTACGCAGGTATTTTTAGCGTTCCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAGCGTTTCGGCGGACGGTAAGACCCTCACGCTAAACGTTGGTTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATCGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAGCAAGTATGACGCGATCGACAACGGGGTAATTACCGATAGCCGACCAACTTCGGTTGTAGACCCGGATTCATTGGGTGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGAATGAGCGTCGAAACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGTAAGGATGGTGGGAACTGGAATAACGTTCCGCGCACTGCGACAACGCAGGTTGATATCGAAGGCATCTATGCTGGTGAATATCAGGCCCGCGTAAGGTGCATCAGCGGTGGGAATGTGGCGTCTCCGTGGTCTGCATTGGCAACCGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTTGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGATCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACACTGATTCCTTACCCGGCTTCTGAATACTGGCATTCAATTCTTCCCGCTGGCTACGTTAACTTCTACAAAGCCAGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCGTCGACTGATGTTAACGCCATCACGGATGTTATCCTGGATGAGATCCTCGACAGCGACGCGATGAAGGAGCTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGAATACGCGAACAGTATCTTGCATAACGCAATAGCAAACGACGCAGACGTTAGAATAATGCGCAAGGAGAACGGTAAGCGTAAAGCAGAGATTAAAAAAACTGAATCGCTGATCGCAGATGAATCACAAGCGCGAGCAACGCAAATTAACGAACTGAGGGTTGAATTTGATGAAGAACTAACAGCGAGTATTAAGCAAGTTAACGACGCAATCGCAACAGAAAGTGATACAAGAGCAACGCAAATAGATCAGTTAAACGCAACATTCACGACTGAGATAGGCGGCGTAAAAACAGATATGAATGCTGGCTTTACGCAGGTTAACGAAGCGATTGCAAGCGAGAGCGACGCGCGGGCAAGTTCCGAGGCGGCACTGGATGCAAAAATCGGGCAGAACTCCGCAGCGCTAGATCAGAAACTCGATTCGTGGGCAGACGTTAATGGCGTCGGTTCAATGTACACGATGAAGTTGGGATTGAAGTACAACGGACAGGAATATAATTCAGGGATGGCGCTACAGCTTACCGCAAGTGGCGGAAGCGTTGTTTCTCAAGTTCTGTTTATTGCTGATAGATTCGCTATCATCCGAAATGCAGCATCCGGCGCGTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAGCGCACTTATTCAGGACGGTTCAATTAACAACGCCAAGATCGGCAACTTCATTCAGTCTAACAACTATGTTGAAAACCAAAGTGGCTGGGCTATCAACAAGGATGGTGGGGCTCAGTTCAATAATGCGATCTTCCGTGGTACTATATACGCGACTGATGGTATCTTTAAGGGTACGGTGCAGGCCGAAAGATTCATTGGTGATATTGCAACTTCCGCTTCATTTAATGGCTTCACGATTAAGGGAGGTGAAGGTGCTGGTACTATGAATGCATGGTATCAGAATAGTGGCTACCCGATGACAATCACCATGAACTGTACTGTACGATGCAATTCATATAGTGGAGGTGTAGCAGACCAGAGTAATGACTTTTTCGTAGTTCTCACGTTCAACATTAACGGAGTGCAGAGCACGAGGCGCGTCGTTGTCGATATGCGGGAGAAAGCGCGCGGCCTTGTAGATATTCCGCAATCGTTCACCGTTAATATTCCTGCGAGTAACAGCAGGATCGGGATCTCACTAAGAGGTGAAAGTTTCGGCCCACAGCAAAGTGAGGTGACAGTAGGTAATATTGTTGTGACAGCATTCCGAAGCAACAATGGTTCCTTCGGACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47d0aa44d0941e9f972aee9d4c5e592e0cc415e6776de065c2c189ee1e896e62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank