Protein

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Genbank accession
YP_009600969.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSLQFTQITDKHTLKDLTTQVNNIGLELTKSDNIFEVTDDLTTDINKSQKVKLTNDSGGAKRPNSISFLHDIKEPGYYYIHQSVLQRVPDRPTVAPRDALLVVYPVYTTGTAVIVQQLYTISFSDTELSSVYRYVNNTTASNWQHNVLLPGNKSRTYANMDVLDINTPGTHFIFRGSNLPVRAGSGLISVVSSEYYGKVFIYVDNETNKIYTSNSNGSGTLNWKSQIEVKDLKPFLLSDVDDNLAVKGTNIGIKVSDNKSFGNFIQDYVTRTNQHVLTFYCQGGVVGNPAGSDSCRGLFISSASEDDFGYGVYYAISNGGRLYTGTVTNSSWNESQKYPIMKELWTGTHNFKDTKKKEKMSDSIDNYNYVEIYTNYRALQNTKGTDKTGTLCHKFYVDGDGIYVCSGSYVSGDPDRIGVEYYRVTLTISGDTWTIKDSAVNNNKNQYIKRIVGLSI
Physico‐chemical
properties
protein length:456 AA
molecular weight: 50937,18490 Da
isoelectric point:6,71276
aromaticity:0,10965
hydropathy:-0,44649

Domains

Domains [InterPro]
DC_1773
STR
10–246
DC_1773 IPR057110
DC_0448
STR
197–456
DC_0448
YP_009600969.1
1 456
Architecture
STR
STR 10-456
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009600969.1
1 456
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,8074
Central domain 237 435 200 0,0306
C-terminal 436 456 20 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-435
C-terminal
436-456

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiIBB-SEP1
[NCBI] 		1340769 Uroviricota > Caudoviricetes > Herelleviridae > Sepunavirus > Sepunavirus SEP1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600969.1 [NCBI]
Genbank nucleotide accession
NC_041928.1 [NCBI]
CDS location
range 45433 -> 46803
strand +
CDS
ATGTCCTTACAATTTACACAAATAACAGATAAACATACATTGAAAGACTTAACAACTCAAGTTAATAATATTGGGCTTGAGTTAACTAAGTCAGACAATATATTTGAAGTAACTGATGACTTAACCACAGACATTAATAAGTCACAGAAAGTTAAATTAACTAATGATTCAGGTGGAGCTAAAAGACCTAATAGTATTAGTTTCCTTCATGATATTAAAGAACCTGGATATTATTATATCCATCAAAGTGTACTACAAAGAGTTCCTGACAGACCTACAGTAGCACCTCGTGATGCACTTTTAGTTGTATACCCAGTATATACAACAGGTACAGCTGTAATTGTACAGCAGTTATATACTATTAGTTTCTCTGATACAGAATTAAGTTCGGTGTATAGATATGTTAATAATACAACAGCTTCTAACTGGCAACATAATGTGTTACTCCCAGGAAACAAAAGTAGAACATACGCTAACATGGATGTATTAGATATTAATACACCAGGAACACATTTTATATTCAGAGGCTCTAATTTACCTGTAAGAGCTGGTTCTGGTTTAATATCAGTTGTATCATCAGAATATTATGGAAAAGTATTTATTTATGTTGACAATGAAACTAATAAGATATATACTAGTAATAGTAACGGTTCAGGTACATTAAATTGGAAATCACAAATAGAAGTAAAAGATTTAAAACCTTTTTTACTGTCCGATGTAGATGATAACTTAGCTGTTAAAGGTACTAACATAGGTATTAAAGTATCAGATAATAAATCTTTTGGTAACTTTATACAAGATTACGTAACAAGAACTAATCAGCATGTTTTAACATTTTATTGTCAAGGTGGCGTAGTAGGAAACCCTGCGGGGTCAGATTCTTGTAGAGGGTTATTTATTTCTAGTGCTTCAGAAGATGATTTTGGATATGGTGTATATTATGCTATATCTAATGGTGGAAGGTTATATACAGGTACGGTAACGAATAGTAGTTGGAATGAATCTCAAAAGTATCCTATAATGAAAGAATTATGGACTGGAACTCATAACTTTAAAGATACAAAGAAAAAAGAAAAAATGTCAGATAGCATAGACAATTATAATTATGTAGAGATATATACAAACTATAGAGCCTTACAAAATACAAAGGGAACAGATAAAACAGGTACTTTATGTCATAAGTTTTATGTCGATGGTGATGGTATCTATGTATGCTCAGGTTCTTATGTATCAGGAGACCCTGATAGAATAGGTGTAGAGTATTACCGAGTAACATTAACTATTTCAGGAGATACTTGGACTATTAAAGATAGTGCAGTAAATAATAATAAAAATCAATACATTAAAAGAATAGTTGGATTATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a447418dae146011ba3632a8eb33a17feaba665fcb8c512967f6683039414a2c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7834
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50